Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc1bQ920F6 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.39■□□□□ 0.85
Smc1bQ920F6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Smc1bQ920F6 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc1bQ920F6 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc1bQ920F6 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smc1bQ920F6 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1bQ920F6 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1bQ920F6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.38■□□□□ 0.85
Smc1bQ920F6 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Smc1bQ920F6 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Smc1bQ920F6 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1bQ920F6 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1bQ920F6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1bQ920F6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1bQ920F6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1bQ920F6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1bQ920F6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1bQ920F6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1bQ920F6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1bQ920F6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.38■□□□□ 0.85
Smc1bQ920F6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1bQ920F6 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1bQ920F6 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smc1bQ920F6 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.38■□□□□ 0.85
Smc1bQ920F6 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Smc1bQ920F6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Smc1bQ920F6 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.37■□□□□ 0.85
Smc1bQ920F6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1bQ920F6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1bQ920F6 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC20.37■□□□□ 0.85
Smc1bQ920F6 Gm10517-202ENSMUST00000192970 758 ntBASIC20.37■□□□□ 0.85
Smc1bQ920F6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.37■□□□□ 0.85
Smc1bQ920F6 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.37■□□□□ 0.85
Smc1bQ920F6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Smc1bQ920F6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1bQ920F6 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Smc1bQ920F6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1bQ920F6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1bQ920F6 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1bQ920F6 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.37■□□□□ 0.85
Smc1bQ920F6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.37■□□□□ 0.85
Smc1bQ920F6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1bQ920F6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Smc1bQ920F6 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1bQ920F6 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Smc1bQ920F6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Smc1bQ920F6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Smc1bQ920F6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1bQ920F6 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1bQ920F6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1bQ920F6 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.36■□□□□ 0.85
Smc1bQ920F6 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1bQ920F6 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1bQ920F6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1bQ920F6 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC20.36■□□□□ 0.85
Smc1bQ920F6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.36■□□□□ 0.85
Smc1bQ920F6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Smc1bQ920F6 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1bQ920F6 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1bQ920F6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1bQ920F6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1bQ920F6 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Smc1bQ920F6 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1bQ920F6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.35■□□□□ 0.85
Smc1bQ920F6 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Smc1bQ920F6 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1bQ920F6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1bQ920F6 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.35■□□□□ 0.85
Smc1bQ920F6 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1bQ920F6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1bQ920F6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1bQ920F6 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1bQ920F6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1bQ920F6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Smc1bQ920F6 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1bQ920F6 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1bQ920F6 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1bQ920F6 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1bQ920F6 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Smc1bQ920F6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.35■□□□□ 0.85
Smc1bQ920F6 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc1bQ920F6 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc1bQ920F6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc1bQ920F6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Smc1bQ920F6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc1bQ920F6 Gm10138-203ENSMUST00000206952 366 ntBASIC20.34■□□□□ 0.85
Smc1bQ920F6 Timm23-208ENSMUST00000226683 750 ntBASIC20.34■□□□□ 0.85
Smc1bQ920F6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc1bQ920F6 Mtag2-201ENSMUST00000058665 714 ntBASIC20.34■□□□□ 0.85
Smc1bQ920F6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.34■□□□□ 0.85
Smc1bQ920F6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Smc1bQ920F6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Smc1bQ920F6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smc1bQ920F6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC20.34■□□□□ 0.85
Smc1bQ920F6 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.34■□□□□ 0.85
Smc1bQ920F6 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.33■□□□□ 0.85
Smc1bQ920F6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc1bQ920F6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smc1bQ920F6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms