Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdha8Q91Y12 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Gm38285-201ENSMUST00000192928 922 ntBASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdha8Q91Y12 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdha8Q91Y12 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha8Q91Y12 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha8Q91Y12 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha8Q91Y12 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha8Q91Y12 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha8Q91Y12 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha8Q91Y12 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha8Q91Y12 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.22■□□□□ 0.35
Pcdha8Q91Y12 Gm4968-201ENSMUST00000071458 858 ntBASIC17.22■□□□□ 0.35
Pcdha8Q91Y12 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha8Q91Y12 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha8Q91Y12 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.22■□□□□ 0.35
Pcdha8Q91Y12 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.22■□□□□ 0.35
Pcdha8Q91Y12 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha8Q91Y12 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdha8Q91Y12 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Zfp783-201ENSMUST00000095946 670 ntBASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdha8Q91Y12 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdha8Q91Y12 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Pcdha8Q91Y12 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Pcdha8Q91Y12 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha8Q91Y12 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha8Q91Y12 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha8Q91Y12 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha8Q91Y12 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha8Q91Y12 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdha8Q91Y12 Gm2559-201ENSMUST00000201323 363 ntBASIC17.2■□□□□ 0.34
Pcdha8Q91Y12 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha8Q91Y12 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha8Q91Y12 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha8Q91Y12 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdha8Q91Y12 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.2■□□□□ 0.34
Pcdha8Q91Y12 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha8Q91Y12 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdha8Q91Y12 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdha8Q91Y12 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdha8Q91Y12 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms