Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhac1Q91Y10 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhac1Q91Y10 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhac1Q91Y10 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhac1Q91Y10 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhac1Q91Y10 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.55■□□□□ 0.24
Pcdhac1Q91Y10 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhac1Q91Y10 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhac1Q91Y10 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhac1Q91Y10 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdhac1Q91Y10 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhac1Q91Y10 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhac1Q91Y10 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhac1Q91Y10 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhac1Q91Y10 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhac1Q91Y10 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhac1Q91Y10 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhac1Q91Y10 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.55■□□□□ 0.24
Pcdhac1Q91Y10 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdhac1Q91Y10 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdhac1Q91Y10 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Mir5133-201ENSMUST00000174955 77 ntBASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdhac1Q91Y10 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhac1Q91Y10 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhac1Q91Y10 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms