Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pcdhb18Q91Y02 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb18Q91Y02 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb18Q91Y02 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb18Q91Y02 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.5■□□□□ 0.55
Pcdhb18Q91Y02 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb18Q91Y02 Mir2861-201ENSMUST00000175539 82 ntBASIC18.5■□□□□ 0.55
Pcdhb18Q91Y02 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.5■□□□□ 0.55
Pcdhb18Q91Y02 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb18Q91Y02 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.5■□□□□ 0.55
Pcdhb18Q91Y02 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb18Q91Y02 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.5■□□□□ 0.55
Pcdhb18Q91Y02 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pcdhb18Q91Y02 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pcdhb18Q91Y02 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb18Q91Y02 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb18Q91Y02 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Pcdhb18Q91Y02 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb18Q91Y02 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.48■□□□□ 0.55
Pcdhb18Q91Y02 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pcdhb18Q91Y02 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb18Q91Y02 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb18Q91Y02 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb18Q91Y02 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.48■□□□□ 0.55
Pcdhb18Q91Y02 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb18Q91Y02 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb18Q91Y02 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pcdhb18Q91Y02 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Pcdhb18Q91Y02 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Gm12085-201ENSMUST00000119263 940 ntBASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pcdhb18Q91Y02 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb18Q91Y02 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb18Q91Y02 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb18Q91Y02 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.46■□□□□ 0.55
Pcdhb18Q91Y02 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb18Q91Y02 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.46■□□□□ 0.55
Pcdhb18Q91Y02 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.46■□□□□ 0.55
Pcdhb18Q91Y02 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.46■□□□□ 0.55
Pcdhb18Q91Y02 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb18Q91Y02 Gm6659-201ENSMUST00000174752 547 ntBASIC18.46■□□□□ 0.55
Pcdhb18Q91Y02 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.46■□□□□ 0.55
Pcdhb18Q91Y02 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb18Q91Y02 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.46■□□□□ 0.55
Pcdhb18Q91Y02 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb18Q91Y02 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Pcdhb18Q91Y02 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pcdhb18Q91Y02 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pcdhb18Q91Y02 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
Pcdhb18Q91Y02 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb18Q91Y02 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.45■□□□□ 0.54
Pcdhb18Q91Y02 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb18Q91Y02 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb18Q91Y02 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.45■□□□□ 0.54
Pcdhb18Q91Y02 Gm27463-201ENSMUST00000183569 57 ntBASIC18.45■□□□□ 0.54
Pcdhb18Q91Y02 Gm10517-202ENSMUST00000192970 758 ntBASIC18.45■□□□□ 0.54
Pcdhb18Q91Y02 Gm18959-201ENSMUST00000208954 655 ntBASIC18.45■□□□□ 0.54
Pcdhb18Q91Y02 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb18Q91Y02 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb18Q91Y02 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.45■□□□□ 0.54
Pcdhb18Q91Y02 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb18Q91Y02 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pcdhb18Q91Y02 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms