Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pcdhb3Q91XZ7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pcdhb3Q91XZ7 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb3Q91XZ7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb3Q91XZ7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Pcdhb3Q91XZ7 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pcdhb3Q91XZ7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Gm13234-201ENSMUST00000120010 747 ntBASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb3Q91XZ7 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb3Q91XZ7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb3Q91XZ7 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb3Q91XZ7 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Pcdhb3Q91XZ7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb3Q91XZ7 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb3Q91XZ7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb3Q91XZ7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb3Q91XZ7 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.62■□□□□ 0.41
Pcdhb3Q91XZ7 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb3Q91XZ7 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb3Q91XZ7 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Pcdhb3Q91XZ7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb3Q91XZ7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.62■□□□□ 0.41
Pcdhb3Q91XZ7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb3Q91XZ7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms