Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga6Q91XY2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga6Q91XY2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga6Q91XY2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhga6Q91XY2 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Gm37292-201ENSMUST00000192062 758 ntBASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Gm45058-201ENSMUST00000205810 766 ntBASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Pcdhga6Q91XY2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga6Q91XY2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga6Q91XY2 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga6Q91XY2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga6Q91XY2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhga6Q91XY2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhga6Q91XY2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga6Q91XY2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhga6Q91XY2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhga6Q91XY2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga6Q91XY2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga6Q91XY2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhga6Q91XY2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga6Q91XY2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga6Q91XY2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga6Q91XY2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Pcdhga6Q91XY2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhga6Q91XY2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 Ank2-226ENSMUST00000189368 339 ntBASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhga6Q91XY2 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga6Q91XY2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga6Q91XY2 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga6Q91XY2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga6Q91XY2 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga6Q91XY2 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhga6Q91XY2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga6Q91XY2 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga6Q91XY2 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga6Q91XY2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga6Q91XY2 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga6Q91XY2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga6Q91XY2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhga6Q91XY2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhga6Q91XY2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga6Q91XY2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga6Q91XY2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhga6Q91XY2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga6Q91XY2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga6Q91XY2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga6Q91XY2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhga6Q91XY2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga6Q91XY2 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.53■□□□□ 0.4
Pcdhga6Q91XY2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga6Q91XY2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga6Q91XY2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhga6Q91XY2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.53■□□□□ 0.4
Pcdhga6Q91XY2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.53■□□□□ 0.4
Pcdhga6Q91XY2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhga6Q91XY2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhga6Q91XY2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhga6Q91XY2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms