Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 Mtag2-201ENSMUST00000058665 714 ntBASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhgb4Q91XX6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.72■□□□□ 0.59
Pcdhgb4Q91XX6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb4Q91XX6 Flg-201ENSMUST00000050758 1488 ntBASIC18.71■□□□□ 0.59
Pcdhgb4Q91XX6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb4Q91XX6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb4Q91XX6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb4Q91XX6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Pcdhgb4Q91XX6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb4Q91XX6 Gm11927-201ENSMUST00000118472 759 ntBASIC18.71■□□□□ 0.59
Pcdhgb4Q91XX6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.71■□□□□ 0.59
Pcdhgb4Q91XX6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.71■□□□□ 0.59
Pcdhgb4Q91XX6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb4Q91XX6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb4Q91XX6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb4Q91XX6 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb4Q91XX6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb4Q91XX6 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb4Q91XX6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhgb4Q91XX6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Gm10602-201ENSMUST00000098239 609 ntBASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhgb4Q91XX6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhgb4Q91XX6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb4Q91XX6 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb4Q91XX6 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb4Q91XX6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.68■□□□□ 0.58
Pcdhgb4Q91XX6 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb4Q91XX6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.68■□□□□ 0.58
Pcdhgb4Q91XX6 AC108858.1-201ENSMUST00000228461 1498 ntBASIC18.68■□□□□ 0.58
Pcdhgb4Q91XX6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb4Q91XX6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb4Q91XX6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb4Q91XX6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhgb4Q91XX6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms