Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb17Q91VD8 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb17Q91VD8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb17Q91VD8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb17Q91VD8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb17Q91VD8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb17Q91VD8 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb17Q91VD8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhb17Q91VD8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb17Q91VD8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb17Q91VD8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb17Q91VD8 Grk6-206ENSMUST00000224995 2971 ntBASIC18.31■□□□□ 0.52
Pcdhb17Q91VD8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb17Q91VD8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb17Q91VD8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb17Q91VD8 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb17Q91VD8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb17Q91VD8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb17Q91VD8 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb17Q91VD8 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb17Q91VD8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb17Q91VD8 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhb17Q91VD8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb17Q91VD8 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb17Q91VD8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 Gm13401-201ENSMUST00000117074 291 ntBASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb17Q91VD8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb17Q91VD8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Gm9519-201ENSMUST00000206108 1337 ntBASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Gm12382-201ENSMUST00000122005 922 ntBASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Gm6576-201ENSMUST00000169678 883 ntBASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Gm38230-201ENSMUST00000193572 1159 ntBASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb17Q91VD8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb17Q91VD8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms