Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Odf4Q8VI88 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Odf4Q8VI88 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Odf4Q8VI88 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Odf4Q8VI88 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Odf4Q8VI88 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.82■□□□□ 0.12
Odf4Q8VI88 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Odf4Q8VI88 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Odf4Q8VI88 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.82■□□□□ 0.12
Odf4Q8VI88 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Odf4Q8VI88 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.81■□□□□ 0.12
Odf4Q8VI88 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Odf4Q8VI88 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.81■□□□□ 0.12
Odf4Q8VI88 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC15.81■□□□□ 0.12
Odf4Q8VI88 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Odf4Q8VI88 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Trmt13-210ENSMUST00000198454 880 ntBASIC15.8■□□□□ 0.12
Odf4Q8VI88 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Rab3c-203ENSMUST00000224180 967 ntBASIC15.8■□□□□ 0.12
Odf4Q8VI88 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Odf4Q8VI88 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Gm37856-201ENSMUST00000191634 999 ntBASIC15.79■□□□□ 0.12
Odf4Q8VI88 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Odf4Q8VI88 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Odf4Q8VI88 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Odf4Q8VI88 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Odf4Q8VI88 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Odf4Q8VI88 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Odf4Q8VI88 Gm26524-201ENSMUST00000192339 390 ntBASIC15.78■□□□□ 0.12
Odf4Q8VI88 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Odf4Q8VI88 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Odf4Q8VI88 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Odf4Q8VI88 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Odf4Q8VI88 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Odf4Q8VI88 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Odf4Q8VI88 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Odf4Q8VI88 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Odf4Q8VI88 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Odf4Q8VI88 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Odf4Q8VI88 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Odf4Q8VI88 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Odf4Q8VI88 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Odf4Q8VI88 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Odf4Q8VI88 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Odf4Q8VI88 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms