Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.85■□□□□ 0.61
Lmcd1Q8VEE1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.85■□□□□ 0.61
Lmcd1Q8VEE1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lmcd1Q8VEE1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lmcd1Q8VEE1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lmcd1Q8VEE1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lmcd1Q8VEE1 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lmcd1Q8VEE1 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Lmcd1Q8VEE1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Lmcd1Q8VEE1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lmcd1Q8VEE1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lmcd1Q8VEE1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lmcd1Q8VEE1 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.84■□□□□ 0.61
Lmcd1Q8VEE1 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.84■□□□□ 0.61
Lmcd1Q8VEE1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Lmcd1Q8VEE1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lmcd1Q8VEE1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lmcd1Q8VEE1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Lmcd1Q8VEE1 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lmcd1Q8VEE1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Lmcd1Q8VEE1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Lmcd1Q8VEE1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Lmcd1Q8VEE1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Lmcd1Q8VEE1 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.83■□□□□ 0.61
Lmcd1Q8VEE1 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Lmcd1Q8VEE1 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lmcd1Q8VEE1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Lmcd1Q8VEE1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lmcd1Q8VEE1 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.83■□□□□ 0.6
Lmcd1Q8VEE1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lmcd1Q8VEE1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lmcd1Q8VEE1 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lmcd1Q8VEE1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lmcd1Q8VEE1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Lmcd1Q8VEE1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lmcd1Q8VEE1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lmcd1Q8VEE1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lmcd1Q8VEE1 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lmcd1Q8VEE1 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.82■□□□□ 0.6
Lmcd1Q8VEE1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lmcd1Q8VEE1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lmcd1Q8VEE1 Gm18195-201ENSMUST00000207604 706 ntBASIC18.82■□□□□ 0.6
Lmcd1Q8VEE1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lmcd1Q8VEE1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lmcd1Q8VEE1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lmcd1Q8VEE1 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lmcd1Q8VEE1 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lmcd1Q8VEE1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Mir770-201ENSMUST00000103252 94 ntBASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Olfr129-201ENSMUST00000122318 993 ntBASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Gm9731-201ENSMUST00000209480 747 ntBASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Lmcd1Q8VEE1 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Lmcd1Q8VEE1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.8■□□□□ 0.6
Lmcd1Q8VEE1 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lmcd1Q8VEE1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lmcd1Q8VEE1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lmcd1Q8VEE1 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lmcd1Q8VEE1 Gm43347-201ENSMUST00000200226 580 ntBASIC18.8■□□□□ 0.6
Lmcd1Q8VEE1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.8■□□□□ 0.6
Lmcd1Q8VEE1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lmcd1Q8VEE1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Lmcd1Q8VEE1 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lmcd1Q8VEE1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Lmcd1Q8VEE1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lmcd1Q8VEE1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lmcd1Q8VEE1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lmcd1Q8VEE1 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lmcd1Q8VEE1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lmcd1Q8VEE1 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lmcd1Q8VEE1 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lmcd1Q8VEE1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lmcd1Q8VEE1 Gm13401-201ENSMUST00000117074 291 ntBASIC18.79■□□□□ 0.6
Lmcd1Q8VEE1 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lmcd1Q8VEE1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lmcd1Q8VEE1 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lmcd1Q8VEE1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lmcd1Q8VEE1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lmcd1Q8VEE1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lmcd1Q8VEE1 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lmcd1Q8VEE1 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Lmcd1Q8VEE1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lmcd1Q8VEE1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms