Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Tmc1Q8R4P5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Tmc1Q8R4P5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tmc1Q8R4P5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC21.68■■□□□ 1.06
Tmc1Q8R4P5 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tmc1Q8R4P5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Tmc1Q8R4P5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tmc1Q8R4P5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Tmc1Q8R4P5 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tmc1Q8R4P5 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Tmc1Q8R4P5 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Tmc1Q8R4P5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Tmc1Q8R4P5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Tmc1Q8R4P5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Tmc1Q8R4P5 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.67■■□□□ 1.06
Tmc1Q8R4P5 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tmc1Q8R4P5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tmc1Q8R4P5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tmc1Q8R4P5 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tmc1Q8R4P5 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.67■■□□□ 1.06
Tmc1Q8R4P5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Tmc1Q8R4P5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tmc1Q8R4P5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Tmc1Q8R4P5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC21.67■■□□□ 1.06
Tmc1Q8R4P5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Tmc1Q8R4P5 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 Gm28265-201ENSMUST00000188201 2319 ntBASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Tmc1Q8R4P5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Tmc1Q8R4P5 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.65■■□□□ 1.06
Tmc1Q8R4P5 Gm45774-201ENSMUST00000211992 2665 ntBASIC21.65■■□□□ 1.06
Tmc1Q8R4P5 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tmc1Q8R4P5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tmc1Q8R4P5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
Tmc1Q8R4P5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC21.65■■□□□ 1.06
Tmc1Q8R4P5 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tmc1Q8R4P5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tmc1Q8R4P5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
Tmc1Q8R4P5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Tmc1Q8R4P5 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.64■■□□□ 1.05
Tmc1Q8R4P5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tmc1Q8R4P5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tmc1Q8R4P5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC21.64■■□□□ 1.05
Tmc1Q8R4P5 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Gm42918-201ENSMUST00000199249 1580 ntBASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Mir5133-201ENSMUST00000174955 77 ntBASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Tmc1Q8R4P5 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tmc1Q8R4P5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
Tmc1Q8R4P5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tmc1Q8R4P5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.62■■□□□ 1.05
Tmc1Q8R4P5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tmc1Q8R4P5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tmc1Q8R4P5 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tmc1Q8R4P5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tmc1Q8R4P5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Tmc1Q8R4P5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tmc1Q8R4P5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Tmc1Q8R4P5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Tmc1Q8R4P5 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Tmc1Q8R4P5 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC21.62■■□□□ 1.05
Tmc1Q8R4P5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Tmc1Q8R4P5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tmc1Q8R4P5 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tmc1Q8R4P5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Tmc1Q8R4P5 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tmc1Q8R4P5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tmc1Q8R4P5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms