Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chrna3Q8R4G9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chrna3Q8R4G9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chrna3Q8R4G9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Chrna3Q8R4G9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.37■□□□□ 0.37
Chrna3Q8R4G9 Gm715-201ENSMUST00000117865 831 ntBASIC17.37■□□□□ 0.37
Chrna3Q8R4G9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chrna3Q8R4G9 Fst-202ENSMUST00000223640 2612 ntBASIC17.37■□□□□ 0.37
Chrna3Q8R4G9 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.37■□□□□ 0.37
Chrna3Q8R4G9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chrna3Q8R4G9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chrna3Q8R4G9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chrna3Q8R4G9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chrna3Q8R4G9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chrna3Q8R4G9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chrna3Q8R4G9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.36■□□□□ 0.37
Chrna3Q8R4G9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chrna3Q8R4G9 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Chrna3Q8R4G9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.36■□□□□ 0.37
Chrna3Q8R4G9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chrna3Q8R4G9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chrna3Q8R4G9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chrna3Q8R4G9 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chrna3Q8R4G9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chrna3Q8R4G9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Chrna3Q8R4G9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.36■□□□□ 0.37
Chrna3Q8R4G9 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Chrna3Q8R4G9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Gm11643-201ENSMUST00000119578 864 ntBASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Chrna3Q8R4G9 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chrna3Q8R4G9 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.33■□□□□ 0.37
Chrna3Q8R4G9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chrna3Q8R4G9 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chrna3Q8R4G9 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chrna3Q8R4G9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Chrna3Q8R4G9 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Chrna3Q8R4G9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Chrna3Q8R4G9 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.33■□□□□ 0.36
Chrna3Q8R4G9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.33■□□□□ 0.36
Chrna3Q8R4G9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna3Q8R4G9 Mir6982-201ENSMUST00000184354 68 ntBASIC17.33■□□□□ 0.36
Chrna3Q8R4G9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna3Q8R4G9 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna3Q8R4G9 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna3Q8R4G9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna3Q8R4G9 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna3Q8R4G9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna3Q8R4G9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna3Q8R4G9 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna3Q8R4G9 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna3Q8R4G9 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Chrna3Q8R4G9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna3Q8R4G9 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna3Q8R4G9 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna3Q8R4G9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna3Q8R4G9 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chrna3Q8R4G9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms