Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Gm11927-201ENSMUST00000118472 759 ntBASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Gm30025-201ENSMUST00000218555 728 ntBASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cuedc1Q8R3V6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cuedc1Q8R3V6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cuedc1Q8R3V6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cuedc1Q8R3V6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cuedc1Q8R3V6 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cuedc1Q8R3V6 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cuedc1Q8R3V6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cuedc1Q8R3V6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.05■□□□□ 0.16
Cuedc1Q8R3V6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cuedc1Q8R3V6 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cuedc1Q8R3V6 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.05■□□□□ 0.16
Cuedc1Q8R3V6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cuedc1Q8R3V6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cuedc1Q8R3V6 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Cuedc1Q8R3V6 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cuedc1Q8R3V6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cuedc1Q8R3V6 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cuedc1Q8R3V6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cuedc1Q8R3V6 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cuedc1Q8R3V6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cuedc1Q8R3V6 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cuedc1Q8R3V6 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cuedc1Q8R3V6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.04■□□□□ 0.16
Cuedc1Q8R3V6 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cuedc1Q8R3V6 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cuedc1Q8R3V6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cuedc1Q8R3V6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cuedc1Q8R3V6 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cuedc1Q8R3V6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cuedc1Q8R3V6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cuedc1Q8R3V6 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cuedc1Q8R3V6 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.02■□□□□ 0.16
Cuedc1Q8R3V6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.02■□□□□ 0.16
Cuedc1Q8R3V6 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cuedc1Q8R3V6 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cuedc1Q8R3V6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cuedc1Q8R3V6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cuedc1Q8R3V6 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Cuedc1Q8R3V6 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Cuedc1Q8R3V6 Gm7367-201ENSMUST00000057611 492 ntBASIC16.02■□□□□ 0.16
Cuedc1Q8R3V6 Gm10819-201ENSMUST00000099988 561 ntBASIC16.02■□□□□ 0.16
Cuedc1Q8R3V6 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cuedc1Q8R3V6 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cuedc1Q8R3V6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cuedc1Q8R3V6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cuedc1Q8R3V6 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cuedc1Q8R3V6 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cuedc1Q8R3V6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cuedc1Q8R3V6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cuedc1Q8R3V6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms