Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.83■□□□□ 0.77
Ushbp1Q8R370 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ushbp1Q8R370 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Ushbp1Q8R370 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ushbp1Q8R370 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ushbp1Q8R370 Gm37055-201ENSMUST00000191866 133 ntBASIC19.83■□□□□ 0.77
Ushbp1Q8R370 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ushbp1Q8R370 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ushbp1Q8R370 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ushbp1Q8R370 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ushbp1Q8R370 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ushbp1Q8R370 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ushbp1Q8R370 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ushbp1Q8R370 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ushbp1Q8R370 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.82■□□□□ 0.76
Ushbp1Q8R370 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ushbp1Q8R370 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
Ushbp1Q8R370 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ushbp1Q8R370 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ushbp1Q8R370 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ushbp1Q8R370 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ushbp1Q8R370 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.82■□□□□ 0.76
Ushbp1Q8R370 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ushbp1Q8R370 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Zfp783-201ENSMUST00000095946 670 ntBASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ushbp1Q8R370 Gm15378-201ENSMUST00000121894 207 ntBASIC19.8■□□□□ 0.76
Ushbp1Q8R370 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.8■□□□□ 0.76
Ushbp1Q8R370 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.8■□□□□ 0.76
Ushbp1Q8R370 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ushbp1Q8R370 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ushbp1Q8R370 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.8■□□□□ 0.76
Ushbp1Q8R370 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ushbp1Q8R370 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC19.8■□□□□ 0.76
Ushbp1Q8R370 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ushbp1Q8R370 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Ushbp1Q8R370 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Gm8969-201ENSMUST00000199694 526 ntBASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Idnk-204ENSMUST00000226010 1898 ntBASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ushbp1Q8R370 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ushbp1Q8R370 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.78■□□□□ 0.76
Ushbp1Q8R370 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ushbp1Q8R370 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ushbp1Q8R370 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ushbp1Q8R370 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ushbp1Q8R370 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ushbp1Q8R370 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.78■□□□□ 0.76
Ushbp1Q8R370 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ushbp1Q8R370 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.78■□□□□ 0.76
Ushbp1Q8R370 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ushbp1Q8R370 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ushbp1Q8R370 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ushbp1Q8R370 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.77■□□□□ 0.76
Ushbp1Q8R370 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC19.77■□□□□ 0.76
Ushbp1Q8R370 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ushbp1Q8R370 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms