Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.98■□□□□ 0.63
Rpp40Q8R1F9 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.98■□□□□ 0.63
Rpp40Q8R1F9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpp40Q8R1F9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC18.98■□□□□ 0.63
Rpp40Q8R1F9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Rpp40Q8R1F9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
Rpp40Q8R1F9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpp40Q8R1F9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpp40Q8R1F9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpp40Q8R1F9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Rpp40Q8R1F9 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 Mir6982-201ENSMUST00000184354 68 ntBASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Rpp40Q8R1F9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp40Q8R1F9 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp40Q8R1F9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp40Q8R1F9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp40Q8R1F9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp40Q8R1F9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Rpp40Q8R1F9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.96■□□□□ 0.63
Rpp40Q8R1F9 Gm37055-201ENSMUST00000191866 133 ntBASIC18.96■□□□□ 0.63
Rpp40Q8R1F9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.96■□□□□ 0.63
Rpp40Q8R1F9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp40Q8R1F9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp40Q8R1F9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp40Q8R1F9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp40Q8R1F9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Rpp40Q8R1F9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Rpp40Q8R1F9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp40Q8R1F9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp40Q8R1F9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp40Q8R1F9 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp40Q8R1F9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.95■□□□□ 0.62
Rpp40Q8R1F9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp40Q8R1F9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp40Q8R1F9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp40Q8R1F9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp40Q8R1F9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp40Q8R1F9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp40Q8R1F9 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp40Q8R1F9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.95■□□□□ 0.62
Rpp40Q8R1F9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Rpp40Q8R1F9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpp40Q8R1F9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rpp40Q8R1F9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpp40Q8R1F9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.94■□□□□ 0.62
Rpp40Q8R1F9 Gm4974-201ENSMUST00000209974 875 ntBASIC18.94■□□□□ 0.62
Rpp40Q8R1F9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpp40Q8R1F9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpp40Q8R1F9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rpp40Q8R1F9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Rpp40Q8R1F9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Rpp40Q8R1F9 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.94■□□□□ 0.62
Rpp40Q8R1F9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
Rpp40Q8R1F9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Rpp40Q8R1F9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rpp40Q8R1F9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpp40Q8R1F9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Rpp40Q8R1F9 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Rpp40Q8R1F9 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Rpp40Q8R1F9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rpp40Q8R1F9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.92■□□□□ 0.62
Rpp40Q8R1F9 Gm21814-202ENSMUST00000203277 873 ntBASIC18.92■□□□□ 0.62
Rpp40Q8R1F9 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms