Protein–RNA interactions for Protein: Q8N7N6

Traf3ip2, TRAF3-interacting protein 2, mousemouse

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3ip2Q8N7N6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Traf3ip2Q8N7N6 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Traf3ip2Q8N7N6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Traf3ip2Q8N7N6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Traf3ip2Q8N7N6 Gm37820-201ENSMUST00000194021 2147 ntBASIC18.34■□□□□ 0.53
Traf3ip2Q8N7N6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Traf3ip2Q8N7N6 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.34■□□□□ 0.53
Traf3ip2Q8N7N6 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Traf3ip2Q8N7N6 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Traf3ip2Q8N7N6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Traf3ip2Q8N7N6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.33■□□□□ 0.53
Traf3ip2Q8N7N6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Traf3ip2Q8N7N6 Gm13401-201ENSMUST00000117074 291 ntBASIC18.33■□□□□ 0.52
Traf3ip2Q8N7N6 Gm13559-201ENSMUST00000120476 863 ntBASIC18.33■□□□□ 0.52
Traf3ip2Q8N7N6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Traf3ip2Q8N7N6 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.33■□□□□ 0.52
Traf3ip2Q8N7N6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.33■□□□□ 0.52
Traf3ip2Q8N7N6 Gm38027-201ENSMUST00000192315 235 ntBASIC18.33■□□□□ 0.52
Traf3ip2Q8N7N6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Traf3ip2Q8N7N6 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Traf3ip2Q8N7N6 Gm9987-201ENSMUST00000069768 567 ntBASIC18.33■□□□□ 0.52
Traf3ip2Q8N7N6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Traf3ip2Q8N7N6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Traf3ip2Q8N7N6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Traf3ip2Q8N7N6 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Traf3ip2Q8N7N6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Gm12085-201ENSMUST00000119263 940 ntBASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Traf3ip2Q8N7N6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Gm11539-201ENSMUST00000119837 557 ntBASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Gm13436-201ENSMUST00000120418 567 ntBASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.31■□□□□ 0.52
Traf3ip2Q8N7N6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf3ip2Q8N7N6 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Traf3ip2Q8N7N6 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf3ip2Q8N7N6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf3ip2Q8N7N6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Traf3ip2Q8N7N6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf3ip2Q8N7N6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf3ip2Q8N7N6 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Traf3ip2Q8N7N6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Traf3ip2Q8N7N6 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf3ip2Q8N7N6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf3ip2Q8N7N6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Traf3ip2Q8N7N6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf3ip2Q8N7N6 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Traf3ip2Q8N7N6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf3ip2Q8N7N6 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Traf3ip2Q8N7N6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Traf3ip2Q8N7N6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Traf3ip2Q8N7N6 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Traf3ip2Q8N7N6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Traf3ip2Q8N7N6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Traf3ip2Q8N7N6 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Traf3ip2Q8N7N6 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.29■□□□□ 0.52
Traf3ip2Q8N7N6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Traf3ip2Q8N7N6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Traf3ip2Q8N7N6 Gm27463-201ENSMUST00000183569 57 ntBASIC18.29■□□□□ 0.52
Traf3ip2Q8N7N6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.29■□□□□ 0.52
Traf3ip2Q8N7N6 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Traf3ip2Q8N7N6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Traf3ip2Q8N7N6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Traf3ip2Q8N7N6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Traf3ip2Q8N7N6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms