Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ebf4Q8K4J2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ebf4Q8K4J2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ebf4Q8K4J2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ebf4Q8K4J2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf4Q8K4J2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf4Q8K4J2 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf4Q8K4J2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf4Q8K4J2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf4Q8K4J2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Ebf4Q8K4J2 Gm38205-201ENSMUST00000192243 258 ntBASIC16.13■□□□□ 0.17
Ebf4Q8K4J2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf4Q8K4J2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf4Q8K4J2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.13■□□□□ 0.17
Ebf4Q8K4J2 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.13■□□□□ 0.17
Ebf4Q8K4J2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf4Q8K4J2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.13■□□□□ 0.17
Ebf4Q8K4J2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ebf4Q8K4J2 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ebf4Q8K4J2 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.11■□□□□ 0.17
Ebf4Q8K4J2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ebf4Q8K4J2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ebf4Q8K4J2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf4Q8K4J2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf4Q8K4J2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf4Q8K4J2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf4Q8K4J2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf4Q8K4J2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ebf4Q8K4J2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ebf4Q8K4J2 Gm11421-201ENSMUST00000122124 294 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms