Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cchcr1Q8K2I2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cchcr1Q8K2I2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cchcr1Q8K2I2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cchcr1Q8K2I2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Cchcr1Q8K2I2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cchcr1Q8K2I2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cchcr1Q8K2I2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC20.94■□□□□ 0.94
Cchcr1Q8K2I2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Cchcr1Q8K2I2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
Cchcr1Q8K2I2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.94■□□□□ 0.94
Cchcr1Q8K2I2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cchcr1Q8K2I2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cchcr1Q8K2I2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cchcr1Q8K2I2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cchcr1Q8K2I2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cchcr1Q8K2I2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cchcr1Q8K2I2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cchcr1Q8K2I2 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cchcr1Q8K2I2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.94■□□□□ 0.94
Cchcr1Q8K2I2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cchcr1Q8K2I2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cchcr1Q8K2I2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Cchcr1Q8K2I2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cchcr1Q8K2I2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cchcr1Q8K2I2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cchcr1Q8K2I2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cchcr1Q8K2I2 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cchcr1Q8K2I2 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cchcr1Q8K2I2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cchcr1Q8K2I2 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Gm29791-202ENSMUST00000207888 369 ntBASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cchcr1Q8K2I2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cchcr1Q8K2I2 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cchcr1Q8K2I2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cchcr1Q8K2I2 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cchcr1Q8K2I2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cchcr1Q8K2I2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.89■□□□□ 0.94
Cchcr1Q8K2I2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cchcr1Q8K2I2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cchcr1Q8K2I2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cchcr1Q8K2I2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cchcr1Q8K2I2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cchcr1Q8K2I2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms