Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn1Q8K0T0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rtn1Q8K0T0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn1Q8K0T0 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Rtn1Q8K0T0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn1Q8K0T0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn1Q8K0T0 Gm13401-201ENSMUST00000117074 291 ntBASIC20.43■□□□□ 0.86
Rtn1Q8K0T0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.43■□□□□ 0.86
Rtn1Q8K0T0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.43■□□□□ 0.86
Rtn1Q8K0T0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn1Q8K0T0 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn1Q8K0T0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn1Q8K0T0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn1Q8K0T0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rtn1Q8K0T0 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn1Q8K0T0 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn1Q8K0T0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn1Q8K0T0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC20.42■□□□□ 0.86
Rtn1Q8K0T0 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.42■□□□□ 0.86
Rtn1Q8K0T0 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn1Q8K0T0 Gm10698-201ENSMUST00000182663 604 ntBASIC20.42■□□□□ 0.86
Rtn1Q8K0T0 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn1Q8K0T0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn1Q8K0T0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn1Q8K0T0 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn1Q8K0T0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rtn1Q8K0T0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn1Q8K0T0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn1Q8K0T0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.41■□□□□ 0.86
Rtn1Q8K0T0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn1Q8K0T0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn1Q8K0T0 Gm11643-201ENSMUST00000119578 864 ntBASIC20.41■□□□□ 0.86
Rtn1Q8K0T0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn1Q8K0T0 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC20.41■□□□□ 0.86
Rtn1Q8K0T0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn1Q8K0T0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn1Q8K0T0 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC20.41■□□□□ 0.86
Rtn1Q8K0T0 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn1Q8K0T0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.41■□□□□ 0.86
Rtn1Q8K0T0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn1Q8K0T0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rtn1Q8K0T0 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn1Q8K0T0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn1Q8K0T0 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.4■□□□□ 0.86
Rtn1Q8K0T0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn1Q8K0T0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rtn1Q8K0T0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.4■□□□□ 0.86
Rtn1Q8K0T0 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rtn1Q8K0T0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rtn1Q8K0T0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rtn1Q8K0T0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rtn1Q8K0T0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn1Q8K0T0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn1Q8K0T0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.39■□□□□ 0.85
Rtn1Q8K0T0 Gm8520-201ENSMUST00000186517 868 ntBASIC20.39■□□□□ 0.85
Rtn1Q8K0T0 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Rtn1Q8K0T0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn1Q8K0T0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn1Q8K0T0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn1Q8K0T0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rtn1Q8K0T0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Gm37292-201ENSMUST00000192062 758 ntBASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rtn1Q8K0T0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn1Q8K0T0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn1Q8K0T0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.37■□□□□ 0.85
Rtn1Q8K0T0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn1Q8K0T0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn1Q8K0T0 Gm15378-201ENSMUST00000121894 207 ntBASIC20.37■□□□□ 0.85
Rtn1Q8K0T0 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn1Q8K0T0 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn1Q8K0T0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn1Q8K0T0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn1Q8K0T0 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.37■□□□□ 0.85
Rtn1Q8K0T0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn1Q8K0T0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Rtn1Q8K0T0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rtn1Q8K0T0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms