Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rfwd3Q8CIK8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Gm27011-201ENSMUST00000182352 972 ntBASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Rfwd3Q8CIK8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rfwd3Q8CIK8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Rfwd3Q8CIK8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd3Q8CIK8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd3Q8CIK8 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.64■□□□□ 0.25
Rfwd3Q8CIK8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd3Q8CIK8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.64■□□□□ 0.25
Rfwd3Q8CIK8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd3Q8CIK8 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd3Q8CIK8 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd3Q8CIK8 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rfwd3Q8CIK8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rfwd3Q8CIK8 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd3Q8CIK8 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd3Q8CIK8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd3Q8CIK8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd3Q8CIK8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd3Q8CIK8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rfwd3Q8CIK8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd3Q8CIK8 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rfwd3Q8CIK8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.63■□□□□ 0.25
Rfwd3Q8CIK8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Rfwd3Q8CIK8 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd3Q8CIK8 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd3Q8CIK8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd3Q8CIK8 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.63■□□□□ 0.25
Rfwd3Q8CIK8 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd3Q8CIK8 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd3Q8CIK8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rfwd3Q8CIK8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd3Q8CIK8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd3Q8CIK8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd3Q8CIK8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd3Q8CIK8 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rfwd3Q8CIK8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd3Q8CIK8 Gm13158-201ENSMUST00000122007 736 ntBASIC16.62■□□□□ 0.25
Rfwd3Q8CIK8 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd3Q8CIK8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd3Q8CIK8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd3Q8CIK8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rfwd3Q8CIK8 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd3Q8CIK8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rfwd3Q8CIK8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Mtag2-201ENSMUST00000058665 714 ntBASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rfwd3Q8CIK8 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.6■□□□□ 0.25
Rfwd3Q8CIK8 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfwd3Q8CIK8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfwd3Q8CIK8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfwd3Q8CIK8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rfwd3Q8CIK8 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfwd3Q8CIK8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rfwd3Q8CIK8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rfwd3Q8CIK8 Gm18666-201ENSMUST00000190039 958 ntBASIC16.6■□□□□ 0.25
Rfwd3Q8CIK8 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms