Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Gm7889-201ENSMUST00000185591 958 ntBASIC20■□□□□ 0.79
Depdc1aQ8CIG0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Depdc1aQ8CIG0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Gm10231-201ENSMUST00000181584 441 ntBASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Gm7977-201ENSMUST00000193787 748 ntBASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Gm10175-202ENSMUST00000208752 441 ntBASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Depdc1aQ8CIG0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1aQ8CIG0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1aQ8CIG0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Depdc1aQ8CIG0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1aQ8CIG0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1aQ8CIG0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1aQ8CIG0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1aQ8CIG0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Depdc1aQ8CIG0 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.98■□□□□ 0.79
Depdc1aQ8CIG0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Depdc1aQ8CIG0 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Depdc1aQ8CIG0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Depdc1aQ8CIG0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1aQ8CIG0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1aQ8CIG0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1aQ8CIG0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Depdc1aQ8CIG0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1aQ8CIG0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Depdc1aQ8CIG0 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC19.96■□□□□ 0.79
Depdc1aQ8CIG0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.96■□□□□ 0.79
Depdc1aQ8CIG0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1aQ8CIG0 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1aQ8CIG0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.96■□□□□ 0.79
Depdc1aQ8CIG0 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Depdc1aQ8CIG0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Depdc1aQ8CIG0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1aQ8CIG0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1aQ8CIG0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Depdc1aQ8CIG0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Depdc1aQ8CIG0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Depdc1aQ8CIG0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Depdc1aQ8CIG0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Depdc1aQ8CIG0 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Depdc1aQ8CIG0 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.95■□□□□ 0.78
Depdc1aQ8CIG0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.95■□□□□ 0.78
Depdc1aQ8CIG0 Gm27463-201ENSMUST00000183569 57 ntBASIC19.95■□□□□ 0.78
Depdc1aQ8CIG0 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.95■□□□□ 0.78
Depdc1aQ8CIG0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Depdc1aQ8CIG0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Depdc1aQ8CIG0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Depdc1aQ8CIG0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Depdc1aQ8CIG0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms