Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Gm11539-201ENSMUST00000119837 557 ntBASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Gm13436-201ENSMUST00000120418 567 ntBASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rdh1Q8CGV4 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.21■□□□□ 0.34
Rdh1Q8CGV4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rdh1Q8CGV4 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rdh1Q8CGV4 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rdh1Q8CGV4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Gm6433-201ENSMUST00000118634 875 ntBASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rdh1Q8CGV4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rdh1Q8CGV4 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Gm13559-201ENSMUST00000120476 863 ntBASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Gm38027-201ENSMUST00000192315 235 ntBASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rdh1Q8CGV4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Rdh1Q8CGV4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.17■□□□□ 0.34
Rdh1Q8CGV4 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rdh1Q8CGV4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rdh1Q8CGV4 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.17■□□□□ 0.34
Rdh1Q8CGV4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.17■□□□□ 0.34
Rdh1Q8CGV4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rdh1Q8CGV4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rdh1Q8CGV4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rdh1Q8CGV4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.17■□□□□ 0.34
Rdh1Q8CGV4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Rdh1Q8CGV4 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms