Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc2Q8CG48 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc2Q8CG48 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc2Q8CG48 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc2Q8CG48 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Smc2Q8CG48 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Smc2Q8CG48 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc2Q8CG48 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc2Q8CG48 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc2Q8CG48 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc2Q8CG48 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc2Q8CG48 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Smc2Q8CG48 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.26■□□□□ 0.83
Smc2Q8CG48 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc2Q8CG48 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc2Q8CG48 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.26■□□□□ 0.83
Smc2Q8CG48 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc2Q8CG48 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc2Q8CG48 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smc2Q8CG48 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Smc2Q8CG48 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc2Q8CG48 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc2Q8CG48 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.25■□□□□ 0.83
Smc2Q8CG48 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC20.25■□□□□ 0.83
Smc2Q8CG48 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Smc2Q8CG48 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Smc2Q8CG48 Gm10602-201ENSMUST00000098239 609 ntBASIC20.25■□□□□ 0.83
Smc2Q8CG48 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Smc2Q8CG48 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc2Q8CG48 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc2Q8CG48 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc2Q8CG48 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smc2Q8CG48 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Smc2Q8CG48 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smc2Q8CG48 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Smc2Q8CG48 Idnk-204ENSMUST00000226010 1898 ntBASIC20.24■□□□□ 0.83
Smc2Q8CG48 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Smc2Q8CG48 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.24■□□□□ 0.83
Smc2Q8CG48 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc2Q8CG48 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Smc2Q8CG48 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Smc2Q8CG48 AC122769.4-201ENSMUST00000228166 901 ntBASIC20.24■□□□□ 0.83
Smc2Q8CG48 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.24■□□□□ 0.83
Smc2Q8CG48 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc2Q8CG48 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc2Q8CG48 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc2Q8CG48 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc2Q8CG48 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Smc2Q8CG48 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smc2Q8CG48 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.24■□□□□ 0.83
Smc2Q8CG48 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC20.24■□□□□ 0.83
Smc2Q8CG48 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC20.23■□□□□ 0.83
Smc2Q8CG48 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc2Q8CG48 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc2Q8CG48 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc2Q8CG48 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc2Q8CG48 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smc2Q8CG48 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc2Q8CG48 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.23■□□□□ 0.83
Smc2Q8CG48 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc2Q8CG48 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.23■□□□□ 0.83
Smc2Q8CG48 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.23■□□□□ 0.83
Smc2Q8CG48 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.23■□□□□ 0.83
Smc2Q8CG48 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc2Q8CG48 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc2Q8CG48 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smc2Q8CG48 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc2Q8CG48 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc2Q8CG48 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc2Q8CG48 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.22■□□□□ 0.83
Smc2Q8CG48 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Smc2Q8CG48 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.22■□□□□ 0.83
Smc2Q8CG48 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc2Q8CG48 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc2Q8CG48 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.22■□□□□ 0.83
Smc2Q8CG48 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smc2Q8CG48 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Smc2Q8CG48 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.22■□□□□ 0.83
Smc2Q8CG48 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc2Q8CG48 Gm10418-201ENSMUST00000100943 576 ntBASIC20.21■□□□□ 0.83
Smc2Q8CG48 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.21■□□□□ 0.83
Smc2Q8CG48 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.21■□□□□ 0.83
Smc2Q8CG48 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smc2Q8CG48 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc2Q8CG48 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Smc2Q8CG48 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.21■□□□□ 0.83
Smc2Q8CG48 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smc2Q8CG48 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc2Q8CG48 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Smc2Q8CG48 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc2Q8CG48 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc2Q8CG48 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.2■□□□□ 0.82
Smc2Q8CG48 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Smc2Q8CG48 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.2■□□□□ 0.82
Smc2Q8CG48 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smc2Q8CG48 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Smc2Q8CG48 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC20.2■□□□□ 0.82
Smc2Q8CG48 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Smc2Q8CG48 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Smc2Q8CG48 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms