Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Ccdc87Q8CDL9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc87Q8CDL9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc87Q8CDL9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc87Q8CDL9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc87Q8CDL9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc87Q8CDL9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccdc87Q8CDL9 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.81■□□□□ 0.6
Ccdc87Q8CDL9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc87Q8CDL9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc87Q8CDL9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc87Q8CDL9 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc87Q8CDL9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc87Q8CDL9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc87Q8CDL9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.8■□□□□ 0.6
Ccdc87Q8CDL9 Gm12933-201ENSMUST00000120203 872 ntBASIC18.8■□□□□ 0.6
Ccdc87Q8CDL9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc87Q8CDL9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc87Q8CDL9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc87Q8CDL9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ccdc87Q8CDL9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccdc87Q8CDL9 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.8■□□□□ 0.6
Ccdc87Q8CDL9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc87Q8CDL9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc87Q8CDL9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc87Q8CDL9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc87Q8CDL9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc87Q8CDL9 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc87Q8CDL9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc87Q8CDL9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc87Q8CDL9 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.79■□□□□ 0.6
Ccdc87Q8CDL9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Ccdc87Q8CDL9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc87Q8CDL9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc87Q8CDL9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc87Q8CDL9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc87Q8CDL9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ccdc87Q8CDL9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Ccdc87Q8CDL9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc87Q8CDL9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc87Q8CDL9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc87Q8CDL9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc87Q8CDL9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.78■□□□□ 0.6
Ccdc87Q8CDL9 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc87Q8CDL9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc87Q8CDL9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc87Q8CDL9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Ccdc87Q8CDL9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc87Q8CDL9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc87Q8CDL9 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc87Q8CDL9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc87Q8CDL9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc87Q8CDL9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ccdc87Q8CDL9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.77■□□□□ 0.6
Ccdc87Q8CDL9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc87Q8CDL9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc87Q8CDL9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.77■□□□□ 0.6
Ccdc87Q8CDL9 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc87Q8CDL9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC18.77■□□□□ 0.6
Ccdc87Q8CDL9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.77■□□□□ 0.6
Ccdc87Q8CDL9 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.77■□□□□ 0.6
Ccdc87Q8CDL9 Gm22325-201ENSMUST00000158904 308 ntBASIC18.77■□□□□ 0.6
Ccdc87Q8CDL9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc87Q8CDL9 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc87Q8CDL9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc87Q8CDL9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc87Q8CDL9 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ccdc87Q8CDL9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Ccdc87Q8CDL9 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.77■□□□□ 0.59
Ccdc87Q8CDL9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc87Q8CDL9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc87Q8CDL9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc87Q8CDL9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc87Q8CDL9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ccdc87Q8CDL9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc87Q8CDL9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc87Q8CDL9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc87Q8CDL9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc87Q8CDL9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc87Q8CDL9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.76■□□□□ 0.59
Ccdc87Q8CDL9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ccdc87Q8CDL9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc87Q8CDL9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc87Q8CDL9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc87Q8CDL9 Mir5133-201ENSMUST00000174955 77 ntBASIC18.75■□□□□ 0.59
Ccdc87Q8CDL9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc87Q8CDL9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc87Q8CDL9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc87Q8CDL9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ccdc87Q8CDL9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ccdc87Q8CDL9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccdc87Q8CDL9 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc87Q8CDL9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc87Q8CDL9 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.74■□□□□ 0.59
Ccdc87Q8CDL9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc87Q8CDL9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.74■□□□□ 0.59
Ccdc87Q8CDL9 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc87Q8CDL9 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.74■□□□□ 0.59
Ccdc87Q8CDL9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ccdc87Q8CDL9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms