Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC20.25■□□□□ 0.83
Rtp1Q8C8C1 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rtp1Q8C8C1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC20.25■□□□□ 0.83
Rtp1Q8C8C1 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC20.25■□□□□ 0.83
Rtp1Q8C8C1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtp1Q8C8C1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtp1Q8C8C1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtp1Q8C8C1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtp1Q8C8C1 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtp1Q8C8C1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtp1Q8C8C1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtp1Q8C8C1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Rtp1Q8C8C1 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtp1Q8C8C1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rtp1Q8C8C1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtp1Q8C8C1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.24■□□□□ 0.83
Rtp1Q8C8C1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtp1Q8C8C1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtp1Q8C8C1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rtp1Q8C8C1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Rtp1Q8C8C1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rtp1Q8C8C1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
Rtp1Q8C8C1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp1Q8C8C1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp1Q8C8C1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp1Q8C8C1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp1Q8C8C1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp1Q8C8C1 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp1Q8C8C1 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp1Q8C8C1 Gm27357-201ENSMUST00000183754 135 ntBASIC20.23■□□□□ 0.83
Rtp1Q8C8C1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC20.23■□□□□ 0.83
Rtp1Q8C8C1 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.23■□□□□ 0.83
Rtp1Q8C8C1 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp1Q8C8C1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp1Q8C8C1 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Rtp1Q8C8C1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp1Q8C8C1 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp1Q8C8C1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp1Q8C8C1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtp1Q8C8C1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rtp1Q8C8C1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Rtp1Q8C8C1 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtp1Q8C8C1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtp1Q8C8C1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtp1Q8C8C1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtp1Q8C8C1 Spr-ps1-201ENSMUST00000089584 605 ntBASIC20.22■□□□□ 0.83
Rtp1Q8C8C1 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtp1Q8C8C1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtp1Q8C8C1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtp1Q8C8C1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rtp1Q8C8C1 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rtp1Q8C8C1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Rtp1Q8C8C1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Rtp1Q8C8C1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtp1Q8C8C1 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtp1Q8C8C1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtp1Q8C8C1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtp1Q8C8C1 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rtp1Q8C8C1 Gm11950-201ENSMUST00000121615 838 ntBASIC20.21■□□□□ 0.83
Rtp1Q8C8C1 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rtp1Q8C8C1 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.21■□□□□ 0.83
Rtp1Q8C8C1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtp1Q8C8C1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtp1Q8C8C1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Rtp1Q8C8C1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Rtp1Q8C8C1 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.21■□□□□ 0.83
Rtp1Q8C8C1 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtp1Q8C8C1 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rtp1Q8C8C1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.2■□□□□ 0.82
Rtp1Q8C8C1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtp1Q8C8C1 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.2■□□□□ 0.82
Rtp1Q8C8C1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rtp1Q8C8C1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rtp1Q8C8C1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Rtp1Q8C8C1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.2■□□□□ 0.82
Rtp1Q8C8C1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Rtp1Q8C8C1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rtp1Q8C8C1 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rtp1Q8C8C1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Rtp1Q8C8C1 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rtp1Q8C8C1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC20.2■□□□□ 0.82
Rtp1Q8C8C1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rtp1Q8C8C1 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Rtp1Q8C8C1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Rtp1Q8C8C1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtp1Q8C8C1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Rtp1Q8C8C1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtp1Q8C8C1 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtp1Q8C8C1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtp1Q8C8C1 Gm11355-201ENSMUST00000121120 306 ntBASIC20.19■□□□□ 0.82
Rtp1Q8C8C1 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.19■□□□□ 0.82
Rtp1Q8C8C1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rtp1Q8C8C1 Gm7213-201ENSMUST00000215977 950 ntBASIC20.19■□□□□ 0.82
Rtp1Q8C8C1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtp1Q8C8C1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtp1Q8C8C1 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtp1Q8C8C1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rtp1Q8C8C1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtp1Q8C8C1 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rtp1Q8C8C1 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms