Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Pabpc5Q8C7D3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pabpc5Q8C7D3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.76■□□□□ 0.43
Pabpc5Q8C7D3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pabpc5Q8C7D3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pabpc5Q8C7D3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pabpc5Q8C7D3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pabpc5Q8C7D3 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pabpc5Q8C7D3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pabpc5Q8C7D3 Gm15565-201ENSMUST00000118890 427 ntBASIC17.76■□□□□ 0.43
Pabpc5Q8C7D3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.76■□□□□ 0.43
Pabpc5Q8C7D3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.76■□□□□ 0.43
Pabpc5Q8C7D3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pabpc5Q8C7D3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Pabpc5Q8C7D3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Pabpc5Q8C7D3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pabpc5Q8C7D3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pabpc5Q8C7D3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pabpc5Q8C7D3 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pabpc5Q8C7D3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.75■□□□□ 0.43
Pabpc5Q8C7D3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pabpc5Q8C7D3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pabpc5Q8C7D3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pabpc5Q8C7D3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.75■□□□□ 0.43
Pabpc5Q8C7D3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pabpc5Q8C7D3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.75■□□□□ 0.43
Pabpc5Q8C7D3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pabpc5Q8C7D3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Pabpc5Q8C7D3 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.75■□□□□ 0.43
Pabpc5Q8C7D3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Pabpc5Q8C7D3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pabpc5Q8C7D3 Gm38308-201ENSMUST00000194934 1809 ntBASIC17.73■□□□□ 0.43
Pabpc5Q8C7D3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pabpc5Q8C7D3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.73■□□□□ 0.43
Pabpc5Q8C7D3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Mtag2-201ENSMUST00000058665 714 ntBASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pabpc5Q8C7D3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Gm37055-201ENSMUST00000191866 133 ntBASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Gm10138-203ENSMUST00000206952 366 ntBASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.71■□□□□ 0.43
Pabpc5Q8C7D3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms