Protein–RNA interactions for Protein: Q8C5V8

Ccdc187, Coiled-coil domain-containing protein 187, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc187Q8C5V8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc187Q8C5V8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.71■□□□□ 0.43
Ccdc187Q8C5V8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc187Q8C5V8 Gm13474-201ENSMUST00000122466 815 ntBASIC17.71■□□□□ 0.43
Ccdc187Q8C5V8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc187Q8C5V8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc187Q8C5V8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ccdc187Q8C5V8 Gm6345-202ENSMUST00000180900 204 ntBASIC17.71■□□□□ 0.43
Ccdc187Q8C5V8 Gm7367-201ENSMUST00000057611 492 ntBASIC17.71■□□□□ 0.43
Ccdc187Q8C5V8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Ccdc187Q8C5V8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc187Q8C5V8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc187Q8C5V8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ccdc187Q8C5V8 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc187Q8C5V8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccdc187Q8C5V8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Ccdc187Q8C5V8 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ccdc187Q8C5V8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc187Q8C5V8 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ccdc187Q8C5V8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc187Q8C5V8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc187Q8C5V8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ccdc187Q8C5V8 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.7■□□□□ 0.42
Ccdc187Q8C5V8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc187Q8C5V8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc187Q8C5V8 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc187Q8C5V8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc187Q8C5V8 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc187Q8C5V8 Golph3-205ENSMUST00000228671 2842 ntBASIC17.7■□□□□ 0.42
Ccdc187Q8C5V8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccdc187Q8C5V8 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Ccdc187Q8C5V8 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Gm37025-201ENSMUST00000195159 829 ntBASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Ccdc187Q8C5V8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc187Q8C5V8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc187Q8C5V8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc187Q8C5V8 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc187Q8C5V8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc187Q8C5V8 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ccdc187Q8C5V8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc187Q8C5V8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.68■□□□□ 0.42
Ccdc187Q8C5V8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.68■□□□□ 0.42
Ccdc187Q8C5V8 Il3ra-202ENSMUST00000223589 738 ntBASIC17.68■□□□□ 0.42
Ccdc187Q8C5V8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc187Q8C5V8 Gm10819-201ENSMUST00000099988 561 ntBASIC17.68■□□□□ 0.42
Ccdc187Q8C5V8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc187Q8C5V8 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc187Q8C5V8 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc187Q8C5V8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc187Q8C5V8 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Gm9731-201ENSMUST00000209480 747 ntBASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Gm7370-201ENSMUST00000219471 767 ntBASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc187Q8C5V8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc187Q8C5V8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc187Q8C5V8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Ccdc187Q8C5V8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc187Q8C5V8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc187Q8C5V8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc187Q8C5V8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc187Q8C5V8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc187Q8C5V8 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc187Q8C5V8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms