Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ptcd1Q8C2E4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ptcd1Q8C2E4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptcd1Q8C2E4 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptcd1Q8C2E4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Ptcd1Q8C2E4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ptcd1Q8C2E4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptcd1Q8C2E4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
Ptcd1Q8C2E4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC21.81■■□□□ 1.08
Ptcd1Q8C2E4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptcd1Q8C2E4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptcd1Q8C2E4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptcd1Q8C2E4 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ptcd1Q8C2E4 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ptcd1Q8C2E4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Ptcd1Q8C2E4 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptcd1Q8C2E4 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptcd1Q8C2E4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptcd1Q8C2E4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptcd1Q8C2E4 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC21.8■■□□□ 1.08
Ptcd1Q8C2E4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptcd1Q8C2E4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ptcd1Q8C2E4 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Ptcd1Q8C2E4 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptcd1Q8C2E4 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ptcd1Q8C2E4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ptcd1Q8C2E4 Gm42922-201ENSMUST00000195887 2078 ntBASIC21.79■■□□□ 1.08
Ptcd1Q8C2E4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC21.79■■□□□ 1.08
Ptcd1Q8C2E4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ptcd1Q8C2E4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.79■■□□□ 1.08
Ptcd1Q8C2E4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Ptcd1Q8C2E4 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ptcd1Q8C2E4 Gm8258-201ENSMUST00000055593 1449 ntBASIC21.79■■□□□ 1.08
Ptcd1Q8C2E4 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptcd1Q8C2E4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptcd1Q8C2E4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Ptcd1Q8C2E4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.78■■□□□ 1.08
Ptcd1Q8C2E4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptcd1Q8C2E4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptcd1Q8C2E4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ptcd1Q8C2E4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptcd1Q8C2E4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptcd1Q8C2E4 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptcd1Q8C2E4 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptcd1Q8C2E4 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ptcd1Q8C2E4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Ptcd1Q8C2E4 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptcd1Q8C2E4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptcd1Q8C2E4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
Ptcd1Q8C2E4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptcd1Q8C2E4 Gm44544-201ENSMUST00000207052 1844 ntBASIC21.77■■□□□ 1.08
Ptcd1Q8C2E4 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptcd1Q8C2E4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptcd1Q8C2E4 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ptcd1Q8C2E4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC21.76■■□□□ 1.07
Ptcd1Q8C2E4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ptcd1Q8C2E4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptcd1Q8C2E4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptcd1Q8C2E4 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC21.76■■□□□ 1.07
Ptcd1Q8C2E4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC21.76■■□□□ 1.07
Ptcd1Q8C2E4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptcd1Q8C2E4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ptcd1Q8C2E4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ptcd1Q8C2E4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ptcd1Q8C2E4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptcd1Q8C2E4 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ptcd1Q8C2E4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ptcd1Q8C2E4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ptcd1Q8C2E4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptcd1Q8C2E4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptcd1Q8C2E4 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptcd1Q8C2E4 Gm27704-201ENSMUST00000185094 107 ntBASIC21.75■■□□□ 1.07
Ptcd1Q8C2E4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ptcd1Q8C2E4 Gm9694-201ENSMUST00000193347 1189 ntBASIC21.75■■□□□ 1.07
Ptcd1Q8C2E4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptcd1Q8C2E4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Ptcd1Q8C2E4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Ptcd1Q8C2E4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ptcd1Q8C2E4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptcd1Q8C2E4 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
Ptcd1Q8C2E4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptcd1Q8C2E4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptcd1Q8C2E4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.74■■□□□ 1.07
Ptcd1Q8C2E4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptcd1Q8C2E4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC21.74■■□□□ 1.07
Ptcd1Q8C2E4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ptcd1Q8C2E4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ptcd1Q8C2E4 Gm43213-201ENSMUST00000151866 1790 ntBASIC21.74■■□□□ 1.07
Ptcd1Q8C2E4 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd1Q8C2E4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd1Q8C2E4 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.73■■□□□ 1.07
Ptcd1Q8C2E4 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd1Q8C2E4 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd1Q8C2E4 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd1Q8C2E4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC21.73■■□□□ 1.07
Ptcd1Q8C2E4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC21.73■■□□□ 1.07
Ptcd1Q8C2E4 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd1Q8C2E4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd1Q8C2E4 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ptcd1Q8C2E4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms