Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trub1Q8C0D0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trub1Q8C0D0 Gm10654-201ENSMUST00000098653 1633 ntBASIC18.27■□□□□ 0.52
Trub1Q8C0D0 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Trub1Q8C0D0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Trub1Q8C0D0 Mir6349-201ENSMUST00000184059 97 ntBASIC18.27■□□□□ 0.52
Trub1Q8C0D0 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trub1Q8C0D0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trub1Q8C0D0 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trub1Q8C0D0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trub1Q8C0D0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Trub1Q8C0D0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trub1Q8C0D0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trub1Q8C0D0 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.26■□□□□ 0.51
Trub1Q8C0D0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.26■□□□□ 0.51
Trub1Q8C0D0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trub1Q8C0D0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trub1Q8C0D0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trub1Q8C0D0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trub1Q8C0D0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trub1Q8C0D0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trub1Q8C0D0 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.26■□□□□ 0.51
Trub1Q8C0D0 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trub1Q8C0D0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trub1Q8C0D0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trub1Q8C0D0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trub1Q8C0D0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trub1Q8C0D0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC18.26■□□□□ 0.51
Trub1Q8C0D0 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trub1Q8C0D0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trub1Q8C0D0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
Trub1Q8C0D0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Trub1Q8C0D0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trub1Q8C0D0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trub1Q8C0D0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trub1Q8C0D0 Gm12527-201ENSMUST00000117967 564 ntBASIC18.25■□□□□ 0.51
Trub1Q8C0D0 Gm15375-201ENSMUST00000119510 849 ntBASIC18.25■□□□□ 0.51
Trub1Q8C0D0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trub1Q8C0D0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trub1Q8C0D0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trub1Q8C0D0 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trub1Q8C0D0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trub1Q8C0D0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trub1Q8C0D0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trub1Q8C0D0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trub1Q8C0D0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trub1Q8C0D0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trub1Q8C0D0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trub1Q8C0D0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trub1Q8C0D0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trub1Q8C0D0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trub1Q8C0D0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trub1Q8C0D0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trub1Q8C0D0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trub1Q8C0D0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trub1Q8C0D0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trub1Q8C0D0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trub1Q8C0D0 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.24■□□□□ 0.51
Trub1Q8C0D0 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trub1Q8C0D0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trub1Q8C0D0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trub1Q8C0D0 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.24■□□□□ 0.51
Trub1Q8C0D0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trub1Q8C0D0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.24■□□□□ 0.51
Trub1Q8C0D0 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trub1Q8C0D0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trub1Q8C0D0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trub1Q8C0D0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trub1Q8C0D0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
Trub1Q8C0D0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trub1Q8C0D0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trub1Q8C0D0 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trub1Q8C0D0 Gm13401-201ENSMUST00000117074 291 ntBASIC18.23■□□□□ 0.51
Trub1Q8C0D0 Gm29257-201ENSMUST00000186115 639 ntBASIC18.23■□□□□ 0.51
Trub1Q8C0D0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Trub1Q8C0D0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trub1Q8C0D0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.23■□□□□ 0.51
Trub1Q8C0D0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trub1Q8C0D0 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.23■□□□□ 0.51
Trub1Q8C0D0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Trub1Q8C0D0 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.22■□□□□ 0.51
Trub1Q8C0D0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trub1Q8C0D0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.22■□□□□ 0.51
Trub1Q8C0D0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trub1Q8C0D0 Gm13158-201ENSMUST00000122007 736 ntBASIC18.22■□□□□ 0.51
Trub1Q8C0D0 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trub1Q8C0D0 Mir8112-201ENSMUST00000184382 131 ntBASIC18.22■□□□□ 0.51
Trub1Q8C0D0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.22■□□□□ 0.51
Trub1Q8C0D0 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.22■□□□□ 0.51
Trub1Q8C0D0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trub1Q8C0D0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trub1Q8C0D0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trub1Q8C0D0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trub1Q8C0D0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trub1Q8C0D0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trub1Q8C0D0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trub1Q8C0D0 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
Trub1Q8C0D0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trub1Q8C0D0 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trub1Q8C0D0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms