Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Suds3Q8BR65 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Suds3Q8BR65 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Suds3Q8BR65 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Suds3Q8BR65 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Suds3Q8BR65 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Suds3Q8BR65 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.16■□□□□ 0.5
Suds3Q8BR65 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.16■□□□□ 0.5
Suds3Q8BR65 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Suds3Q8BR65 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Suds3Q8BR65 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Suds3Q8BR65 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.16■□□□□ 0.5
Suds3Q8BR65 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.16■□□□□ 0.5
Suds3Q8BR65 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Suds3Q8BR65 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Suds3Q8BR65 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Suds3Q8BR65 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
Suds3Q8BR65 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.16■□□□□ 0.5
Suds3Q8BR65 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Suds3Q8BR65 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Suds3Q8BR65 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.16■□□□□ 0.5
Suds3Q8BR65 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Suds3Q8BR65 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.15■□□□□ 0.5
Suds3Q8BR65 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Suds3Q8BR65 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Suds3Q8BR65 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Suds3Q8BR65 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Suds3Q8BR65 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.15■□□□□ 0.5
Suds3Q8BR65 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Suds3Q8BR65 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Suds3Q8BR65 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Suds3Q8BR65 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Suds3Q8BR65 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.15■□□□□ 0.5
Suds3Q8BR65 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Suds3Q8BR65 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Suds3Q8BR65 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Suds3Q8BR65 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Suds3Q8BR65 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Suds3Q8BR65 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Suds3Q8BR65 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Suds3Q8BR65 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Suds3Q8BR65 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Suds3Q8BR65 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.14■□□□□ 0.49
Suds3Q8BR65 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Suds3Q8BR65 Gm12527-201ENSMUST00000117967 564 ntBASIC18.14■□□□□ 0.49
Suds3Q8BR65 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.14■□□□□ 0.49
Suds3Q8BR65 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.14■□□□□ 0.49
Suds3Q8BR65 Gm26524-201ENSMUST00000192339 390 ntBASIC18.14■□□□□ 0.49
Suds3Q8BR65 Rab3c-203ENSMUST00000224180 967 ntBASIC18.14■□□□□ 0.49
Suds3Q8BR65 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Suds3Q8BR65 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.14■□□□□ 0.49
Suds3Q8BR65 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Suds3Q8BR65 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Suds3Q8BR65 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Suds3Q8BR65 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Suds3Q8BR65 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Suds3Q8BR65 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Suds3Q8BR65 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Suds3Q8BR65 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Suds3Q8BR65 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Suds3Q8BR65 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Suds3Q8BR65 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Suds3Q8BR65 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Suds3Q8BR65 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Suds3Q8BR65 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Suds3Q8BR65 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.13■□□□□ 0.49
Suds3Q8BR65 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Suds3Q8BR65 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Suds3Q8BR65 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.13■□□□□ 0.49
Suds3Q8BR65 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Suds3Q8BR65 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Suds3Q8BR65 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Suds3Q8BR65 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Suds3Q8BR65 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Suds3Q8BR65 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Suds3Q8BR65 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Suds3Q8BR65 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Suds3Q8BR65 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Suds3Q8BR65 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Suds3Q8BR65 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Suds3Q8BR65 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Suds3Q8BR65 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Suds3Q8BR65 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Suds3Q8BR65 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Suds3Q8BR65 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Suds3Q8BR65 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Suds3Q8BR65 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Suds3Q8BR65 Gm20049-201ENSMUST00000219950 730 ntBASIC18.11■□□□□ 0.49
Suds3Q8BR65 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms