Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.47■□□□□ 0.07
Cdhr3Q8BL00 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr3Q8BL00 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.46■□□□□ 0.07
Cdhr3Q8BL00 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr3Q8BL00 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr3Q8BL00 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr3Q8BL00 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr3Q8BL00 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr3Q8BL00 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.46■□□□□ 0.07
Cdhr3Q8BL00 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr3Q8BL00 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr3Q8BL00 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.46■□□□□ 0.07
Cdhr3Q8BL00 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr3Q8BL00 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr3Q8BL00 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr3Q8BL00 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr3Q8BL00 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr3Q8BL00 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cdhr3Q8BL00 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cdhr3Q8BL00 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Cdhr3Q8BL00 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Cdhr3Q8BL00 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 Gm10033-202ENSMUST00000211874 928 ntBASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.45■□□□□ 0.06
Cdhr3Q8BL00 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Cdhr3Q8BL00 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Cdhr3Q8BL00 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.43■□□□□ 0.06
Cdhr3Q8BL00 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdhr3Q8BL00 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.43■□□□□ 0.06
Cdhr3Q8BL00 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.43■□□□□ 0.06
Cdhr3Q8BL00 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdhr3Q8BL00 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdhr3Q8BL00 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Cdhr3Q8BL00 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdhr3Q8BL00 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdhr3Q8BL00 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Cdhr3Q8BL00 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdhr3Q8BL00 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Cdhr3Q8BL00 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdhr3Q8BL00 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms