Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc5a7Q8BGY9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc5a7Q8BGY9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc5a7Q8BGY9 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.52■□□□□ 0.08
Slc5a7Q8BGY9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Slc5a7Q8BGY9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc5a7Q8BGY9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc5a7Q8BGY9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc5a7Q8BGY9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc5a7Q8BGY9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.52■□□□□ 0.08
Slc5a7Q8BGY9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc5a7Q8BGY9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc5a7Q8BGY9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc5a7Q8BGY9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Slc5a7Q8BGY9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC15.52■□□□□ 0.08
Slc5a7Q8BGY9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Slc5a7Q8BGY9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc5a7Q8BGY9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc5a7Q8BGY9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.07
Slc5a7Q8BGY9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc5a7Q8BGY9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc5a7Q8BGY9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc5a7Q8BGY9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc5a7Q8BGY9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc5a7Q8BGY9 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.52■□□□□ 0.07
Slc5a7Q8BGY9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc5a7Q8BGY9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc5a7Q8BGY9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 AC093043.1-201ENSMUST00000226700 898 ntBASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc5a7Q8BGY9 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc5a7Q8BGY9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Slc5a7Q8BGY9 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Slc5a7Q8BGY9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Slc5a7Q8BGY9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
Slc5a7Q8BGY9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Slc5a7Q8BGY9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Slc5a7Q8BGY9 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Slc5a7Q8BGY9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Slc5a7Q8BGY9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.49■□□□□ 0.07
Slc5a7Q8BGY9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC15.49■□□□□ 0.07
Slc5a7Q8BGY9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms