Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trim23Q8BGX0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim23Q8BGX0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim23Q8BGX0 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim23Q8BGX0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim23Q8BGX0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trim23Q8BGX0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim23Q8BGX0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim23Q8BGX0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim23Q8BGX0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim23Q8BGX0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.06■□□□□ 0.32
Trim23Q8BGX0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim23Q8BGX0 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trim23Q8BGX0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trim23Q8BGX0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.05■□□□□ 0.32
Trim23Q8BGX0 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Gm37820-201ENSMUST00000194021 2147 ntBASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim23Q8BGX0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Gm13401-201ENSMUST00000117074 291 ntBASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim23Q8BGX0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim23Q8BGX0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim23Q8BGX0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim23Q8BGX0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim23Q8BGX0 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim23Q8BGX0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Trim23Q8BGX0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim23Q8BGX0 Idnk-204ENSMUST00000226010 1898 ntBASIC17.02■□□□□ 0.32
Trim23Q8BGX0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim23Q8BGX0 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim23Q8BGX0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.02■□□□□ 0.32
Trim23Q8BGX0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim23Q8BGX0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim23Q8BGX0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms