Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
U2af1l4Q8BGJ9 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1l4Q8BGJ9 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC20.88■□□□□ 0.93
U2af1l4Q8BGJ9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1l4Q8BGJ9 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
U2af1l4Q8BGJ9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2af1l4Q8BGJ9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
U2af1l4Q8BGJ9 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC20.87■□□□□ 0.93
U2af1l4Q8BGJ9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
U2af1l4Q8BGJ9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.87■□□□□ 0.93
U2af1l4Q8BGJ9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2af1l4Q8BGJ9 Gm5417-201ENSMUST00000079706 384 ntBASIC20.87■□□□□ 0.93
U2af1l4Q8BGJ9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.87■□□□□ 0.93
U2af1l4Q8BGJ9 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
U2af1l4Q8BGJ9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2af1l4Q8BGJ9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
U2af1l4Q8BGJ9 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
U2af1l4Q8BGJ9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.85■□□□□ 0.93
U2af1l4Q8BGJ9 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1l4Q8BGJ9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1l4Q8BGJ9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1l4Q8BGJ9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
U2af1l4Q8BGJ9 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1l4Q8BGJ9 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1l4Q8BGJ9 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1l4Q8BGJ9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
U2af1l4Q8BGJ9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1l4Q8BGJ9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
U2af1l4Q8BGJ9 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1l4Q8BGJ9 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1l4Q8BGJ9 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1l4Q8BGJ9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.85■□□□□ 0.93
U2af1l4Q8BGJ9 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
U2af1l4Q8BGJ9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.84■□□□□ 0.93
U2af1l4Q8BGJ9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.84■□□□□ 0.93
U2af1l4Q8BGJ9 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
U2af1l4Q8BGJ9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1l4Q8BGJ9 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC20.84■□□□□ 0.93
U2af1l4Q8BGJ9 Gm44544-201ENSMUST00000207052 1844 ntBASIC20.84■□□□□ 0.93
U2af1l4Q8BGJ9 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1l4Q8BGJ9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.84■□□□□ 0.93
U2af1l4Q8BGJ9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1l4Q8BGJ9 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.84■□□□□ 0.93
U2af1l4Q8BGJ9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1l4Q8BGJ9 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1l4Q8BGJ9 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC20.84■□□□□ 0.93
U2af1l4Q8BGJ9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1l4Q8BGJ9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
U2af1l4Q8BGJ9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.84■□□□□ 0.93
U2af1l4Q8BGJ9 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.84■□□□□ 0.93
U2af1l4Q8BGJ9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
U2af1l4Q8BGJ9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
U2af1l4Q8BGJ9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
U2af1l4Q8BGJ9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
U2af1l4Q8BGJ9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.83■□□□□ 0.93
U2af1l4Q8BGJ9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
U2af1l4Q8BGJ9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.83■□□□□ 0.93
U2af1l4Q8BGJ9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.83■□□□□ 0.93
U2af1l4Q8BGJ9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
U2af1l4Q8BGJ9 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
U2af1l4Q8BGJ9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
U2af1l4Q8BGJ9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
U2af1l4Q8BGJ9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
U2af1l4Q8BGJ9 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
U2af1l4Q8BGJ9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
U2af1l4Q8BGJ9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
U2af1l4Q8BGJ9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
U2af1l4Q8BGJ9 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
U2af1l4Q8BGJ9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
U2af1l4Q8BGJ9 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.82■□□□□ 0.92
U2af1l4Q8BGJ9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
U2af1l4Q8BGJ9 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.82■□□□□ 0.92
U2af1l4Q8BGJ9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
U2af1l4Q8BGJ9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
U2af1l4Q8BGJ9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
U2af1l4Q8BGJ9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
U2af1l4Q8BGJ9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
U2af1l4Q8BGJ9 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
U2af1l4Q8BGJ9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
U2af1l4Q8BGJ9 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms