Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim50Q810I2 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim50Q810I2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.27■□□□□ 0.35
Trim50Q810I2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim50Q810I2 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trim50Q810I2 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim50Q810I2 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trim50Q810I2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Trim50Q810I2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim50Q810I2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim50Q810I2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Trim50Q810I2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim50Q810I2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim50Q810I2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim50Q810I2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.26■□□□□ 0.35
Trim50Q810I2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim50Q810I2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim50Q810I2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim50Q810I2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim50Q810I2 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim50Q810I2 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim50Q810I2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim50Q810I2 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim50Q810I2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim50Q810I2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim50Q810I2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim50Q810I2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim50Q810I2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim50Q810I2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim50Q810I2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim50Q810I2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.25■□□□□ 0.35
Trim50Q810I2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.25■□□□□ 0.35
Trim50Q810I2 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.25■□□□□ 0.35
Trim50Q810I2 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.25■□□□□ 0.35
Trim50Q810I2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim50Q810I2 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim50Q810I2 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim50Q810I2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim50Q810I2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim50Q810I2 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim50Q810I2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim50Q810I2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim50Q810I2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim50Q810I2 Gm37856-201ENSMUST00000191634 999 ntBASIC17.24■□□□□ 0.35
Trim50Q810I2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim50Q810I2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim50Q810I2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim50Q810I2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim50Q810I2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim50Q810I2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim50Q810I2 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim50Q810I2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim50Q810I2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim50Q810I2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim50Q810I2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim50Q810I2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim50Q810I2 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim50Q810I2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim50Q810I2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim50Q810I2 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.23■□□□□ 0.35
Trim50Q810I2 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC17.23■□□□□ 0.35
Trim50Q810I2 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim50Q810I2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim50Q810I2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.23■□□□□ 0.35
Trim50Q810I2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim50Q810I2 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim50Q810I2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trim50Q810I2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim50Q810I2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim50Q810I2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim50Q810I2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim50Q810I2 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim50Q810I2 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim50Q810I2 Mir2861-201ENSMUST00000175539 82 ntBASIC17.22■□□□□ 0.35
Trim50Q810I2 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.22■□□□□ 0.35
Trim50Q810I2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim50Q810I2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Trim50Q810I2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim50Q810I2 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim50Q810I2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim50Q810I2 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim50Q810I2 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim50Q810I2 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Trim50Q810I2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trim50Q810I2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim50Q810I2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim50Q810I2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Trim50Q810I2 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim50Q810I2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim50Q810I2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim50Q810I2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim50Q810I2 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim50Q810I2 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim50Q810I2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.34
Trim50Q810I2 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim50Q810I2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.2■□□□□ 0.34
Trim50Q810I2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trim50Q810I2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.2■□□□□ 0.34
Trim50Q810I2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trim50Q810I2 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms