Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.27■□□□□ 0.68
Sh3tc2Q80VA5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3tc2Q80VA5 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3tc2Q80VA5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Sh3tc2Q80VA5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sh3tc2Q80VA5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.27■□□□□ 0.68
Sh3tc2Q80VA5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.27■□□□□ 0.68
Sh3tc2Q80VA5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sh3tc2Q80VA5 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sh3tc2Q80VA5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3tc2Q80VA5 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3tc2Q80VA5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Sh3tc2Q80VA5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3tc2Q80VA5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3tc2Q80VA5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3tc2Q80VA5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3tc2Q80VA5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3tc2Q80VA5 Gm33142-201ENSMUST00000193913 867 ntBASIC19.26■□□□□ 0.67
Sh3tc2Q80VA5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.26■□□□□ 0.67
Sh3tc2Q80VA5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Sh3tc2Q80VA5 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.26■□□□□ 0.67
Sh3tc2Q80VA5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Sh3tc2Q80VA5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sh3tc2Q80VA5 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Gm18032-201ENSMUST00000222541 538 ntBASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Sh3tc2Q80VA5 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3tc2Q80VA5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3tc2Q80VA5 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Sh3tc2Q80VA5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3tc2Q80VA5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.24■□□□□ 0.67
Sh3tc2Q80VA5 Gm12085-201ENSMUST00000119263 940 ntBASIC19.24■□□□□ 0.67
Sh3tc2Q80VA5 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3tc2Q80VA5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3tc2Q80VA5 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Sh3tc2Q80VA5 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3tc2Q80VA5 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3tc2Q80VA5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3tc2Q80VA5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3tc2Q80VA5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3tc2Q80VA5 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Sh3tc2Q80VA5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Gm45058-201ENSMUST00000205810 766 ntBASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sh3tc2Q80VA5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3tc2Q80VA5 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3tc2Q80VA5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3tc2Q80VA5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3tc2Q80VA5 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3tc2Q80VA5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.22■□□□□ 0.67
Sh3tc2Q80VA5 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Sh3tc2Q80VA5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Sh3tc2Q80VA5 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Sh3tc2Q80VA5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3tc2Q80VA5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.22■□□□□ 0.67
Sh3tc2Q80VA5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.22■□□□□ 0.67
Sh3tc2Q80VA5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sh3tc2Q80VA5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc2Q80VA5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc2Q80VA5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc2Q80VA5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Sh3tc2Q80VA5 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc2Q80VA5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc2Q80VA5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc2Q80VA5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sh3tc2Q80VA5 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms