Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pif1Q80SX8 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pif1Q80SX8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pif1Q80SX8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pif1Q80SX8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pif1Q80SX8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Pif1Q80SX8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pif1Q80SX8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pif1Q80SX8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pif1Q80SX8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.3■□□□□ 0.2
Pif1Q80SX8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pif1Q80SX8 Gm18959-201ENSMUST00000208954 655 ntBASIC16.3■□□□□ 0.2
Pif1Q80SX8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pif1Q80SX8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.3■□□□□ 0.2
Pif1Q80SX8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pif1Q80SX8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pif1Q80SX8 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pif1Q80SX8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pif1Q80SX8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Mir2861-201ENSMUST00000175539 82 ntBASIC16.29■□□□□ 0.2
Pif1Q80SX8 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Gm7367-201ENSMUST00000057611 492 ntBASIC16.29■□□□□ 0.2
Pif1Q80SX8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pif1Q80SX8 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pif1Q80SX8 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pif1Q80SX8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pif1Q80SX8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pif1Q80SX8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pif1Q80SX8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pif1Q80SX8 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pif1Q80SX8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pif1Q80SX8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pif1Q80SX8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pif1Q80SX8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Pif1Q80SX8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.28■□□□□ 0.2
Pif1Q80SX8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.28■□□□□ 0.2
Pif1Q80SX8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.28■□□□□ 0.2
Pif1Q80SX8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pif1Q80SX8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pif1Q80SX8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pif1Q80SX8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Pif1Q80SX8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pif1Q80SX8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pif1Q80SX8 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.28■□□□□ 0.2
Pif1Q80SX8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pif1Q80SX8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pif1Q80SX8 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pif1Q80SX8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pif1Q80SX8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pif1Q80SX8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pif1Q80SX8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pif1Q80SX8 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pif1Q80SX8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pif1Q80SX8 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pif1Q80SX8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pif1Q80SX8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.27■□□□□ 0.2
Pif1Q80SX8 Gm27463-201ENSMUST00000183569 57 ntBASIC16.27■□□□□ 0.2
Pif1Q80SX8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Pif1Q80SX8 Gm10517-202ENSMUST00000192970 758 ntBASIC16.27■□□□□ 0.2
Pif1Q80SX8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pif1Q80SX8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.27■□□□□ 0.2
Pif1Q80SX8 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pif1Q80SX8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pif1Q80SX8 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.27■□□□□ 0.2
Pif1Q80SX8 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pif1Q80SX8 Rncr4-201ENSMUST00000194541 2234 ntBASIC16.27■□□□□ 0.19
Pif1Q80SX8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pif1Q80SX8 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pif1Q80SX8 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pif1Q80SX8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pif1Q80SX8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Pif1Q80SX8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pif1Q80SX8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pif1Q80SX8 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pif1Q80SX8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.26■□□□□ 0.19
Pif1Q80SX8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pif1Q80SX8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pif1Q80SX8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.26■□□□□ 0.19
Pif1Q80SX8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.26■□□□□ 0.19
Pif1Q80SX8 Gm10819-201ENSMUST00000099988 561 ntBASIC16.26■□□□□ 0.19
Pif1Q80SX8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pif1Q80SX8 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pif1Q80SX8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.26■□□□□ 0.19
Pif1Q80SX8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pif1Q80SX8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms