Protein–RNA interactions for Protein: Q80ST9

Lca5, Lebercilin, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lca5Q80ST9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lca5Q80ST9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Lca5Q80ST9 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lca5Q80ST9 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.2■□□□□ 0.82
Lca5Q80ST9 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.2■□□□□ 0.82
Lca5Q80ST9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.2■□□□□ 0.82
Lca5Q80ST9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lca5Q80ST9 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lca5Q80ST9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lca5Q80ST9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lca5Q80ST9 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Lca5Q80ST9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lca5Q80ST9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lca5Q80ST9 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lca5Q80ST9 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lca5Q80ST9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lca5Q80ST9 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lca5Q80ST9 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lca5Q80ST9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lca5Q80ST9 Gm15565-201ENSMUST00000118890 427 ntBASIC20.19■□□□□ 0.82
Lca5Q80ST9 Gm12085-201ENSMUST00000119263 940 ntBASIC20.19■□□□□ 0.82
Lca5Q80ST9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lca5Q80ST9 Mir8112-201ENSMUST00000184382 131 ntBASIC20.19■□□□□ 0.82
Lca5Q80ST9 Gm38027-201ENSMUST00000192315 235 ntBASIC20.19■□□□□ 0.82
Lca5Q80ST9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lca5Q80ST9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Lca5Q80ST9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lca5Q80ST9 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lca5Q80ST9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lca5Q80ST9 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.19■□□□□ 0.82
Lca5Q80ST9 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lca5Q80ST9 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lca5Q80ST9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lca5Q80ST9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lca5Q80ST9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lca5Q80ST9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lca5Q80ST9 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lca5Q80ST9 Gm24841-201ENSMUST00000158676 357 ntBASIC20.18■□□□□ 0.82
Lca5Q80ST9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.18■□□□□ 0.82
Lca5Q80ST9 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lca5Q80ST9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.18■□□□□ 0.82
Lca5Q80ST9 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.18■□□□□ 0.82
Lca5Q80ST9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lca5Q80ST9 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lca5Q80ST9 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lca5Q80ST9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lca5Q80ST9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.18■□□□□ 0.82
Lca5Q80ST9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lca5Q80ST9 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.18■□□□□ 0.82
Lca5Q80ST9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lca5Q80ST9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
Lca5Q80ST9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lca5Q80ST9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lca5Q80ST9 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.17■□□□□ 0.82
Lca5Q80ST9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Lca5Q80ST9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lca5Q80ST9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lca5Q80ST9 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lca5Q80ST9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lca5Q80ST9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lca5Q80ST9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Lca5Q80ST9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.16■□□□□ 0.82
Lca5Q80ST9 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lca5Q80ST9 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Lca5Q80ST9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lca5Q80ST9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Lca5Q80ST9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lca5Q80ST9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lca5Q80ST9 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lca5Q80ST9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lca5Q80ST9 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lca5Q80ST9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lca5Q80ST9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC20.15■□□□□ 0.82
Lca5Q80ST9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lca5Q80ST9 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lca5Q80ST9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.15■□□□□ 0.82
Lca5Q80ST9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lca5Q80ST9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lca5Q80ST9 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.15■□□□□ 0.82
Lca5Q80ST9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lca5Q80ST9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lca5Q80ST9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lca5Q80ST9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lca5Q80ST9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.15■□□□□ 0.82
Lca5Q80ST9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lca5Q80ST9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.14■□□□□ 0.82
Lca5Q80ST9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Lca5Q80ST9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lca5Q80ST9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Lca5Q80ST9 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lca5Q80ST9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.14■□□□□ 0.81
Lca5Q80ST9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lca5Q80ST9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.14■□□□□ 0.81
Lca5Q80ST9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lca5Q80ST9 Gm30025-201ENSMUST00000218555 728 ntBASIC20.14■□□□□ 0.81
Lca5Q80ST9 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Lca5Q80ST9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Lca5Q80ST9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lca5Q80ST9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lca5Q80ST9 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms