Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.57■□□□□ 0.72
Krt39Q6IFX4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Krt39Q6IFX4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Krt39Q6IFX4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Krt39Q6IFX4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Krt39Q6IFX4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Krt39Q6IFX4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Krt39Q6IFX4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Krt39Q6IFX4 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Krt39Q6IFX4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Krt39Q6IFX4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Krt39Q6IFX4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Krt39Q6IFX4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Krt39Q6IFX4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Krt39Q6IFX4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Krt39Q6IFX4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Krt39Q6IFX4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Krt39Q6IFX4 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Krt39Q6IFX4 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.56■□□□□ 0.72
Krt39Q6IFX4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Krt39Q6IFX4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.56■□□□□ 0.72
Krt39Q6IFX4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Krt39Q6IFX4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Krt39Q6IFX4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.56■□□□□ 0.72
Krt39Q6IFX4 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Krt39Q6IFX4 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Krt39Q6IFX4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Krt39Q6IFX4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Krt39Q6IFX4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Krt39Q6IFX4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Krt39Q6IFX4 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Krt39Q6IFX4 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Krt39Q6IFX4 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Krt39Q6IFX4 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Krt39Q6IFX4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.55■□□□□ 0.72
Krt39Q6IFX4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Krt39Q6IFX4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Krt39Q6IFX4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.55■□□□□ 0.72
Krt39Q6IFX4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Krt39Q6IFX4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Krt39Q6IFX4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Krt39Q6IFX4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.55■□□□□ 0.72
Krt39Q6IFX4 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Krt39Q6IFX4 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Krt39Q6IFX4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Krt39Q6IFX4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Krt39Q6IFX4 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.54■□□□□ 0.72
Krt39Q6IFX4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Krt39Q6IFX4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Krt39Q6IFX4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Krt39Q6IFX4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Krt39Q6IFX4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Krt39Q6IFX4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Krt39Q6IFX4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.54■□□□□ 0.72
Krt39Q6IFX4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Krt39Q6IFX4 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Krt39Q6IFX4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Krt39Q6IFX4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Krt39Q6IFX4 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Krt39Q6IFX4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Krt39Q6IFX4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Krt39Q6IFX4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krt39Q6IFX4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krt39Q6IFX4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krt39Q6IFX4 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krt39Q6IFX4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Krt39Q6IFX4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Krt39Q6IFX4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krt39Q6IFX4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krt39Q6IFX4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Krt39Q6IFX4 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.53■□□□□ 0.72
Krt39Q6IFX4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.53■□□□□ 0.72
Krt39Q6IFX4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.52■□□□□ 0.72
Krt39Q6IFX4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Krt39Q6IFX4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Krt39Q6IFX4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Krt39Q6IFX4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Krt39Q6IFX4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Krt39Q6IFX4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Krt39Q6IFX4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Krt39Q6IFX4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Krt39Q6IFX4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Krt39Q6IFX4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Krt39Q6IFX4 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.52■□□□□ 0.71
Krt39Q6IFX4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Krt39Q6IFX4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Krt39Q6IFX4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Krt39Q6IFX4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krt39Q6IFX4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Krt39Q6IFX4 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krt39Q6IFX4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krt39Q6IFX4 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krt39Q6IFX4 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Krt39Q6IFX4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.51■□□□□ 0.71
Krt39Q6IFX4 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.51■□□□□ 0.71
Krt39Q6IFX4 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Krt39Q6IFX4 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.51■□□□□ 0.71
Krt39Q6IFX4 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Krt39Q6IFX4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.51■□□□□ 0.71
Krt39Q6IFX4 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms