Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.03■□□□□ 0.96
Best3Q6H1V1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Best3Q6H1V1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Best3Q6H1V1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Best3Q6H1V1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Best3Q6H1V1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC21.03■□□□□ 0.96
Best3Q6H1V1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC21.03■□□□□ 0.96
Best3Q6H1V1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Best3Q6H1V1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.02■□□□□ 0.96
Best3Q6H1V1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC21.02■□□□□ 0.96
Best3Q6H1V1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Best3Q6H1V1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Best3Q6H1V1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC21.02■□□□□ 0.96
Best3Q6H1V1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Best3Q6H1V1 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
Best3Q6H1V1 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Best3Q6H1V1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Best3Q6H1V1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Best3Q6H1V1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Best3Q6H1V1 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Best3Q6H1V1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Best3Q6H1V1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Best3Q6H1V1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC21.01■□□□□ 0.95
Best3Q6H1V1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Best3Q6H1V1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Best3Q6H1V1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Best3Q6H1V1 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Best3Q6H1V1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Best3Q6H1V1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Best3Q6H1V1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Best3Q6H1V1 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Best3Q6H1V1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC21■□□□□ 0.95
Best3Q6H1V1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Best3Q6H1V1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21■□□□□ 0.95
Best3Q6H1V1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Best3Q6H1V1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Best3Q6H1V1 Gm37374-201ENSMUST00000194954 1829 ntBASIC21■□□□□ 0.95
Best3Q6H1V1 Gm17807-201ENSMUST00000186869 298 ntBASIC21■□□□□ 0.95
Best3Q6H1V1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Best3Q6H1V1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Best3Q6H1V1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Best3Q6H1V1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Best3Q6H1V1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Best3Q6H1V1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Best3Q6H1V1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Best3Q6H1V1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Best3Q6H1V1 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.99■□□□□ 0.95
Best3Q6H1V1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.99■□□□□ 0.95
Best3Q6H1V1 Gm26039-201ENSMUST00000158152 144 ntBASIC20.99■□□□□ 0.95
Best3Q6H1V1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Best3Q6H1V1 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.99■□□□□ 0.95
Best3Q6H1V1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Best3Q6H1V1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Best3Q6H1V1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Best3Q6H1V1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Best3Q6H1V1 Gm10566-201ENSMUST00000086739 996 ntBASIC20.99■□□□□ 0.95
Best3Q6H1V1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Best3Q6H1V1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Best3Q6H1V1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Best3Q6H1V1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Best3Q6H1V1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Best3Q6H1V1 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Best3Q6H1V1 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Best3Q6H1V1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Best3Q6H1V1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Best3Q6H1V1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Best3Q6H1V1 Gm18958-201ENSMUST00000174258 762 ntBASIC20.98■□□□□ 0.95
Best3Q6H1V1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Best3Q6H1V1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Best3Q6H1V1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Best3Q6H1V1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Best3Q6H1V1 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Best3Q6H1V1 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
Best3Q6H1V1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Best3Q6H1V1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Best3Q6H1V1 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Best3Q6H1V1 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Best3Q6H1V1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Best3Q6H1V1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Best3Q6H1V1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC20.97■□□□□ 0.95
Best3Q6H1V1 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Best3Q6H1V1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Best3Q6H1V1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Best3Q6H1V1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Best3Q6H1V1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Best3Q6H1V1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.97■□□□□ 0.95
Best3Q6H1V1 Gm18669-201ENSMUST00000216049 778 ntBASIC20.97■□□□□ 0.95
Best3Q6H1V1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Best3Q6H1V1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Best3Q6H1V1 Actl10-202ENSMUST00000226583 1501 ntBASIC20.97■□□□□ 0.95
Best3Q6H1V1 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Best3Q6H1V1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Best3Q6H1V1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Best3Q6H1V1 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Best3Q6H1V1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Best3Q6H1V1 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Best3Q6H1V1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Best3Q6H1V1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Best3Q6H1V1 Gm11950-201ENSMUST00000121615 838 ntBASIC20.96■□□□□ 0.95
Best3Q6H1V1 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 102.3 ms