Protein–RNA interactions for Protein: Q684R7

Frem1, FRAS1-related extracellular matrix protein 1, mousemouse

Predictions only

Length 2,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Frem1Q684R7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Frem1Q684R7 Gm10418-201ENSMUST00000100943 576 ntBASIC15.41■□□□□ 0.06
Frem1Q684R7 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.41■□□□□ 0.06
Frem1Q684R7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Frem1Q684R7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Frem1Q684R7 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Frem1Q684R7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Frem1Q684R7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Frem1Q684R7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Frem1Q684R7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Frem1Q684R7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Frem1Q684R7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Frem1Q684R7 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Frem1Q684R7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Frem1Q684R7 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Frem1Q684R7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC15.4■□□□□ 0.06
Frem1Q684R7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Frem1Q684R7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Frem1Q684R7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Frem1Q684R7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Frem1Q684R7 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Frem1Q684R7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Frem1Q684R7 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Frem1Q684R7 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Frem1Q684R7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.06
Frem1Q684R7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Frem1Q684R7 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Frem1Q684R7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.39■□□□□ 0.05
Frem1Q684R7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Frem1Q684R7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Frem1Q684R7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Frem1Q684R7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Frem1Q684R7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Frem1Q684R7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Frem1Q684R7 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.39■□□□□ 0.05
Frem1Q684R7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Frem1Q684R7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Frem1Q684R7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Frem1Q684R7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Frem1Q684R7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Frem1Q684R7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Frem1Q684R7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Frem1Q684R7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Frem1Q684R7 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Frem1Q684R7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Frem1Q684R7 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Frem1Q684R7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Frem1Q684R7 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Frem1Q684R7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Frem1Q684R7 Gm4974-201ENSMUST00000209974 875 ntBASIC15.38■□□□□ 0.05
Frem1Q684R7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Frem1Q684R7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Frem1Q684R7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.38■□□□□ 0.05
Frem1Q684R7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Frem1Q684R7 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Frem1Q684R7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.38■□□□□ 0.05
Frem1Q684R7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.38■□□□□ 0.05
Frem1Q684R7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.38■□□□□ 0.05
Frem1Q684R7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Frem1Q684R7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Frem1Q684R7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Frem1Q684R7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Frem1Q684R7 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Frem1Q684R7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Frem1Q684R7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Frem1Q684R7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Frem1Q684R7 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Frem1Q684R7 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Frem1Q684R7 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Frem1Q684R7 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Frem1Q684R7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Frem1Q684R7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Frem1Q684R7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Frem1Q684R7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Frem1Q684R7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Frem1Q684R7 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Frem1Q684R7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC15.37■□□□□ 0.05
Frem1Q684R7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Frem1Q684R7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Frem1Q684R7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Frem1Q684R7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Frem1Q684R7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Frem1Q684R7 Gm13401-201ENSMUST00000117074 291 ntBASIC15.36■□□□□ 0.05
Frem1Q684R7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.36■□□□□ 0.05
Frem1Q684R7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.36■□□□□ 0.05
Frem1Q684R7 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Frem1Q684R7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Frem1Q684R7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Frem1Q684R7 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Frem1Q684R7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Frem1Q684R7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Frem1Q684R7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.36■□□□□ 0.05
Frem1Q684R7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Frem1Q684R7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Frem1Q684R7 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Frem1Q684R7 Gm2274-201ENSMUST00000184539 609 ntBASIC15.36■□□□□ 0.05
Frem1Q684R7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Frem1Q684R7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Frem1Q684R7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Frem1Q684R7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms