Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Notch3Q61982 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Notch3Q61982 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Notch3Q61982 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Notch3Q61982 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Notch3Q61982 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Notch3Q61982 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Notch3Q61982 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.56□□□□□ -0.24
Notch3Q61982 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.56□□□□□ -0.24
Notch3Q61982 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.56□□□□□ -0.24
Notch3Q61982 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Notch3Q61982 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Notch3Q61982 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.56□□□□□ -0.24
Notch3Q61982 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Notch3Q61982 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Notch3Q61982 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Notch3Q61982 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Notch3Q61982 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Notch3Q61982 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.56□□□□□ -0.24
Notch3Q61982 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Notch3Q61982 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Notch3Q61982 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.56□□□□□ -0.24
Notch3Q61982 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.56□□□□□ -0.24
Notch3Q61982 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Notch3Q61982 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Notch3Q61982 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Notch3Q61982 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Notch3Q61982 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Notch3Q61982 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Notch3Q61982 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Notch3Q61982 Gm30025-201ENSMUST00000218555 728 ntBASIC13.55□□□□□ -0.24
Notch3Q61982 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Notch3Q61982 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.55□□□□□ -0.24
Notch3Q61982 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Notch3Q61982 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Notch3Q61982 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Notch3Q61982 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Notch3Q61982 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Notch3Q61982 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Notch3Q61982 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Notch3Q61982 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Notch3Q61982 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Notch3Q61982 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Notch3Q61982 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Notch3Q61982 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Notch3Q61982 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Notch3Q61982 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.55□□□□□ -0.24
Notch3Q61982 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Notch3Q61982 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Notch3Q61982 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Notch3Q61982 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Notch3Q61982 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Notch3Q61982 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Notch3Q61982 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.54□□□□□ -0.24
Notch3Q61982 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Notch3Q61982 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Notch3Q61982 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Notch3Q61982 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Notch3Q61982 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Notch3Q61982 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Notch3Q61982 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Notch3Q61982 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Notch3Q61982 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Notch3Q61982 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Notch3Q61982 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Notch3Q61982 Gm15375-201ENSMUST00000119510 849 ntBASIC13.53□□□□□ -0.24
Notch3Q61982 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Notch3Q61982 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.53□□□□□ -0.24
Notch3Q61982 AC107452.1-201ENSMUST00000227963 481 ntBASIC13.53□□□□□ -0.24
Notch3Q61982 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Notch3Q61982 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Notch3Q61982 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Notch3Q61982 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Notch3Q61982 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Notch3Q61982 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Notch3Q61982 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Notch3Q61982 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.53□□□□□ -0.24
Notch3Q61982 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Notch3Q61982 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Notch3Q61982 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Notch3Q61982 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Notch3Q61982 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Notch3Q61982 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Notch3Q61982 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Notch3Q61982 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Notch3Q61982 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Notch3Q61982 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Notch3Q61982 Gm7712-202ENSMUST00000222331 1510 ntBASIC13.52□□□□□ -0.24
Notch3Q61982 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Notch3Q61982 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Notch3Q61982 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Notch3Q61982 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Notch3Q61982 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Notch3Q61982 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Notch3Q61982 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Notch3Q61982 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Notch3Q61982 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Notch3Q61982 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.52□□□□□ -0.25
Notch3Q61982 Gm10517-202ENSMUST00000192970 758 ntBASIC13.52□□□□□ -0.25
Notch3Q61982 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms