Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ecm1Q61508 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ecm1Q61508 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ecm1Q61508 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ecm1Q61508 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ecm1Q61508 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.65■□□□□ 0.74
Ecm1Q61508 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ecm1Q61508 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ecm1Q61508 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.65■□□□□ 0.74
Ecm1Q61508 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ecm1Q61508 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.65■□□□□ 0.74
Ecm1Q61508 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
Ecm1Q61508 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ecm1Q61508 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ecm1Q61508 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ecm1Q61508 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ecm1Q61508 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ecm1Q61508 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ecm1Q61508 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ecm1Q61508 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ecm1Q61508 Gm27704-201ENSMUST00000185094 107 ntBASIC19.64■□□□□ 0.73
Ecm1Q61508 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ecm1Q61508 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ecm1Q61508 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ecm1Q61508 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ecm1Q61508 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ecm1Q61508 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ecm1Q61508 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ecm1Q61508 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ecm1Q61508 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ecm1Q61508 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ecm1Q61508 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ecm1Q61508 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ecm1Q61508 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ecm1Q61508 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ecm1Q61508 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
Ecm1Q61508 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ecm1Q61508 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ecm1Q61508 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ecm1Q61508 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ecm1Q61508 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ecm1Q61508 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ecm1Q61508 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ecm1Q61508 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.62■□□□□ 0.73
Ecm1Q61508 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ecm1Q61508 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ecm1Q61508 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ecm1Q61508 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ecm1Q61508 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ecm1Q61508 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.62■□□□□ 0.73
Ecm1Q61508 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ecm1Q61508 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ecm1Q61508 Gm29518-201ENSMUST00000190858 372 ntBASIC19.62■□□□□ 0.73
Ecm1Q61508 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.62■□□□□ 0.73
Ecm1Q61508 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.62■□□□□ 0.73
Ecm1Q61508 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ecm1Q61508 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ecm1Q61508 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ecm1Q61508 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ecm1Q61508 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ecm1Q61508 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ecm1Q61508 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ecm1Q61508 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ecm1Q61508 Notumos-201ENSMUST00000151998 2659 ntBASIC19.61■□□□□ 0.73
Ecm1Q61508 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ecm1Q61508 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ecm1Q61508 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ecm1Q61508 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.61■□□□□ 0.73
Ecm1Q61508 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Ecm1Q61508 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ecm1Q61508 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.61■□□□□ 0.73
Ecm1Q61508 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ecm1Q61508 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ecm1Q61508 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ecm1Q61508 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ecm1Q61508 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ecm1Q61508 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ecm1Q61508 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ecm1Q61508 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ecm1Q61508 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ecm1Q61508 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ecm1Q61508 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ecm1Q61508 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ecm1Q61508 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ecm1Q61508 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ecm1Q61508 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ecm1Q61508 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ecm1Q61508 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ecm1Q61508 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ecm1Q61508 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ecm1Q61508 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ecm1Q61508 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ecm1Q61508 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ecm1Q61508 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ecm1Q61508 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.59■□□□□ 0.73
Ecm1Q61508 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ecm1Q61508 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC19.59■□□□□ 0.73
Ecm1Q61508 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ecm1Q61508 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ecm1Q61508 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms