Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.65■□□□□ 0.26
Sox17Q61473 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sox17Q61473 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.65■□□□□ 0.26
Sox17Q61473 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.65■□□□□ 0.26
Sox17Q61473 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox17Q61473 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Sox17Q61473 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox17Q61473 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox17Q61473 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox17Q61473 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox17Q61473 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox17Q61473 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sox17Q61473 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox17Q61473 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.64■□□□□ 0.25
Sox17Q61473 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Sox17Q61473 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sox17Q61473 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox17Q61473 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Sox17Q61473 Gm26833-201ENSMUST00000180899 440 ntBASIC16.64■□□□□ 0.25
Sox17Q61473 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox17Q61473 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Sox17Q61473 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox17Q61473 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox17Q61473 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Sox17Q61473 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.64■□□□□ 0.25
Sox17Q61473 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.64■□□□□ 0.25
Sox17Q61473 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sox17Q61473 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox17Q61473 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC16.63■□□□□ 0.25
Sox17Q61473 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Sox17Q61473 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox17Q61473 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox17Q61473 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox17Q61473 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox17Q61473 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sox17Q61473 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox17Q61473 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox17Q61473 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox17Q61473 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox17Q61473 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Sox17Q61473 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.62■□□□□ 0.25
Sox17Q61473 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox17Q61473 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox17Q61473 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox17Q61473 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox17Q61473 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox17Q61473 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox17Q61473 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox17Q61473 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.62■□□□□ 0.25
Sox17Q61473 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox17Q61473 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox17Q61473 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Sox17Q61473 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sox17Q61473 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox17Q61473 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox17Q61473 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox17Q61473 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.61■□□□□ 0.25
Sox17Q61473 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox17Q61473 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox17Q61473 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox17Q61473 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox17Q61473 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.61■□□□□ 0.25
Sox17Q61473 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox17Q61473 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox17Q61473 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox17Q61473 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC16.61■□□□□ 0.25
Sox17Q61473 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Sox17Q61473 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox17Q61473 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.61■□□□□ 0.25
Sox17Q61473 Gm6139-201ENSMUST00000079261 882 ntBASIC16.61■□□□□ 0.25
Sox17Q61473 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox17Q61473 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Sox17Q61473 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox17Q61473 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox17Q61473 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Sox17Q61473 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox17Q61473 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox17Q61473 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.61■□□□□ 0.25
Sox17Q61473 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Sox17Q61473 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Sox17Q61473 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Sox17Q61473 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sox17Q61473 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.6■□□□□ 0.25
Sox17Q61473 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox17Q61473 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Sox17Q61473 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox17Q61473 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
Sox17Q61473 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox17Q61473 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.6■□□□□ 0.25
Sox17Q61473 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.6■□□□□ 0.25
Sox17Q61473 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.6■□□□□ 0.25
Sox17Q61473 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox17Q61473 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Sox17Q61473 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.6■□□□□ 0.25
Sox17Q61473 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox17Q61473 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox17Q61473 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Sox17Q61473 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox17Q61473 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox17Q61473 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms