Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn4Q61418 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn4Q61418 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn4Q61418 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Clcn4Q61418 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn4Q61418 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.3■□□□□ 0.2
Clcn4Q61418 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn4Q61418 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn4Q61418 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn4Q61418 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn4Q61418 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.3■□□□□ 0.2
Clcn4Q61418 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn4Q61418 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn4Q61418 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn4Q61418 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn4Q61418 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Clcn4Q61418 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Clcn4Q61418 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn4Q61418 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn4Q61418 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn4Q61418 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn4Q61418 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Clcn4Q61418 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn4Q61418 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn4Q61418 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn4Q61418 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn4Q61418 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn4Q61418 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn4Q61418 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn4Q61418 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Clcn4Q61418 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn4Q61418 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn4Q61418 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.29■□□□□ 0.2
Clcn4Q61418 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn4Q61418 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Clcn4Q61418 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.28■□□□□ 0.2
Clcn4Q61418 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn4Q61418 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn4Q61418 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn4Q61418 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn4Q61418 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn4Q61418 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.28■□□□□ 0.2
Clcn4Q61418 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.28■□□□□ 0.2
Clcn4Q61418 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.28■□□□□ 0.2
Clcn4Q61418 Gm20760-201ENSMUST00000179197 648 ntBASIC16.28■□□□□ 0.2
Clcn4Q61418 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn4Q61418 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn4Q61418 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Clcn4Q61418 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn4Q61418 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn4Q61418 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn4Q61418 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.28■□□□□ 0.2
Clcn4Q61418 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Clcn4Q61418 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn4Q61418 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Clcn4Q61418 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Clcn4Q61418 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn4Q61418 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn4Q61418 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn4Q61418 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn4Q61418 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn4Q61418 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn4Q61418 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn4Q61418 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Clcn4Q61418 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.27■□□□□ 0.2
Clcn4Q61418 Gm6211-202ENSMUST00000167849 925 ntBASIC16.27■□□□□ 0.2
Clcn4Q61418 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.27■□□□□ 0.2
Clcn4Q61418 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn4Q61418 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn4Q61418 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Clcn4Q61418 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Clcn4Q61418 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Clcn4Q61418 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn4Q61418 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn4Q61418 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn4Q61418 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Clcn4Q61418 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn4Q61418 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Clcn4Q61418 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn4Q61418 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn4Q61418 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn4Q61418 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn4Q61418 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn4Q61418 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.26■□□□□ 0.19
Clcn4Q61418 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Clcn4Q61418 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.26■□□□□ 0.19
Clcn4Q61418 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Clcn4Q61418 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.26■□□□□ 0.19
Clcn4Q61418 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn4Q61418 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn4Q61418 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn4Q61418 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn4Q61418 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.26■□□□□ 0.19
Clcn4Q61418 Tgds-204ENSMUST00000228543 1594 ntBASIC16.26■□□□□ 0.19
Clcn4Q61418 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn4Q61418 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Clcn4Q61418 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn4Q61418 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clcn4Q61418 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.25■□□□□ 0.19
Clcn4Q61418 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms