Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr3Q5U430 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr3Q5U430 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Ubr3Q5U430 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr3Q5U430 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC21.6■■□□□ 1.05
Ubr3Q5U430 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr3Q5U430 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
Ubr3Q5U430 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr3Q5U430 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ubr3Q5U430 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr3Q5U430 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr3Q5U430 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr3Q5U430 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr3Q5U430 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr3Q5U430 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr3Q5U430 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC21.59■■□□□ 1.05
Ubr3Q5U430 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Ubr3Q5U430 Gm6443-201ENSMUST00000203599 874 ntBASIC21.59■■□□□ 1.05
Ubr3Q5U430 Gm45328-201ENSMUST00000210942 917 ntBASIC21.59■■□□□ 1.05
Ubr3Q5U430 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr3Q5U430 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr3Q5U430 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr3Q5U430 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Ubr3Q5U430 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr3Q5U430 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ubr3Q5U430 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ubr3Q5U430 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
Ubr3Q5U430 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC21.58■■□□□ 1.05
Ubr3Q5U430 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC21.58■■□□□ 1.05
Ubr3Q5U430 AC124569.2-201ENSMUST00000225998 818 ntBASIC21.58■■□□□ 1.05
Ubr3Q5U430 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ubr3Q5U430 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ubr3Q5U430 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ubr3Q5U430 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ubr3Q5U430 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr3Q5U430 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Ubr3Q5U430 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr3Q5U430 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Ubr3Q5U430 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
Ubr3Q5U430 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC21.57■■□□□ 1.04
Ubr3Q5U430 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr3Q5U430 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC21.57■■□□□ 1.04
Ubr3Q5U430 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr3Q5U430 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr3Q5U430 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ubr3Q5U430 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Ubr3Q5U430 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC21.56■■□□□ 1.04
Ubr3Q5U430 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr3Q5U430 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC21.56■■□□□ 1.04
Ubr3Q5U430 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr3Q5U430 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr3Q5U430 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr3Q5U430 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Ubr3Q5U430 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr3Q5U430 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr3Q5U430 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr3Q5U430 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Ubr3Q5U430 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr3Q5U430 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC21.56■■□□□ 1.04
Ubr3Q5U430 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ubr3Q5U430 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ubr3Q5U430 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ubr3Q5U430 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ubr3Q5U430 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ubr3Q5U430 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ubr3Q5U430 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ubr3Q5U430 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ubr3Q5U430 AC125350.1-201ENSMUST00000225115 903 ntBASIC21.55■■□□□ 1.04
Ubr3Q5U430 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ubr3Q5U430 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ubr3Q5U430 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ubr3Q5U430 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ubr3Q5U430 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr3Q5U430 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr3Q5U430 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr3Q5U430 Gm5712-201ENSMUST00000199748 1043 ntBASIC21.54■■□□□ 1.04
Ubr3Q5U430 AC153889.1-201ENSMUST00000219257 330 ntBASIC21.54■■□□□ 1.04
Ubr3Q5U430 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr3Q5U430 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.54■■□□□ 1.04
Ubr3Q5U430 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr3Q5U430 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr3Q5U430 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ubr3Q5U430 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC21.54■■□□□ 1.04
Ubr3Q5U430 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC21.54■■□□□ 1.04
Ubr3Q5U430 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Ubr3Q5U430 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubr3Q5U430 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC21.53■■□□□ 1.04
Ubr3Q5U430 BC021767-201ENSMUST00000126387 1716 ntBASIC21.53■■□□□ 1.04
Ubr3Q5U430 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubr3Q5U430 AC154855.1-201ENSMUST00000227353 1458 ntBASIC21.53■■□□□ 1.04
Ubr3Q5U430 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.53■■□□□ 1.04
Ubr3Q5U430 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubr3Q5U430 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ubr3Q5U430 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubr3Q5U430 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ubr3Q5U430 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ubr3Q5U430 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ubr3Q5U430 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC21.52■■□□□ 1.04
Ubr3Q5U430 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ubr3Q5U430 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms