Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Gm11643-201ENSMUST00000119578 864 ntBASIC14.12□□□□□ -0.15
Trav2Q5R1I9 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav2Q5R1I9 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav2Q5R1I9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Timm23-208ENSMUST00000226683 750 ntBASIC14.1□□□□□ -0.15
Trav2Q5R1I9 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Gm10654-201ENSMUST00000098653 1633 ntBASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav2Q5R1I9 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Tgds-204ENSMUST00000228543 1594 ntBASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav2Q5R1I9 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav2Q5R1I9 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trav2Q5R1I9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.08□□□□□ -0.15
Trav2Q5R1I9 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.08□□□□□ -0.16
Trav2Q5R1I9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav2Q5R1I9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav2Q5R1I9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav2Q5R1I9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav2Q5R1I9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Trav2Q5R1I9 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav2Q5R1I9 Gm5417-201ENSMUST00000079706 384 ntBASIC14.08□□□□□ -0.16
Trav2Q5R1I9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav2Q5R1I9 Gm43213-201ENSMUST00000151866 1790 ntBASIC14.08□□□□□ -0.16
Trav2Q5R1I9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav2Q5R1I9 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Trav2Q5R1I9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav2Q5R1I9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav2Q5R1I9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav2Q5R1I9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav2Q5R1I9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms