Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav6-3Q5R1E6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Gm10418-201ENSMUST00000100943 576 ntBASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Gm2399-201ENSMUST00000104944 225 ntBASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Gm6211-202ENSMUST00000167849 925 ntBASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Gm7291-201ENSMUST00000199147 382 ntBASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6-3Q5R1E6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-3Q5R1E6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-3Q5R1E6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-3Q5R1E6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-3Q5R1E6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav6-3Q5R1E6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-3Q5R1E6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-3Q5R1E6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav6-3Q5R1E6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-3Q5R1E6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6-3Q5R1E6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6-3Q5R1E6 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6-3Q5R1E6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6-3Q5R1E6 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6-3Q5R1E6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
Trav6-3Q5R1E6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6-3Q5R1E6 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.21□□□□□ -0.14
Trav6-3Q5R1E6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6-3Q5R1E6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Gm29791-202ENSMUST00000207888 369 ntBASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6-3Q5R1E6 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Gm10849-201ENSMUST00000100397 618 ntBASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav6-3Q5R1E6 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms