Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn2bQ56A07 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Scn2bQ56A07 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn2bQ56A07 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC17.53■□□□□ 0.4
Scn2bQ56A07 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Scn2bQ56A07 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn2bQ56A07 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn2bQ56A07 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn2bQ56A07 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn2bQ56A07 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scn2bQ56A07 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Scn2bQ56A07 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Scn2bQ56A07 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn2bQ56A07 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Scn2bQ56A07 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.52■□□□□ 0.4
Scn2bQ56A07 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn2bQ56A07 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.52■□□□□ 0.4
Scn2bQ56A07 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn2bQ56A07 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn2bQ56A07 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.52■□□□□ 0.4
Scn2bQ56A07 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.52■□□□□ 0.4
Scn2bQ56A07 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Scn2bQ56A07 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC17.52■□□□□ 0.4
Scn2bQ56A07 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Scn2bQ56A07 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn2bQ56A07 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Scn2bQ56A07 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.52■□□□□ 0.4
Scn2bQ56A07 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.52■□□□□ 0.4
Scn2bQ56A07 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Scn2bQ56A07 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Scn2bQ56A07 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn2bQ56A07 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn2bQ56A07 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Scn2bQ56A07 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn2bQ56A07 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn2bQ56A07 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn2bQ56A07 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn2bQ56A07 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Scn2bQ56A07 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.52■□□□□ 0.39
Scn2bQ56A07 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2bQ56A07 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2bQ56A07 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2bQ56A07 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2bQ56A07 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2bQ56A07 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2bQ56A07 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.51■□□□□ 0.39
Scn2bQ56A07 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2bQ56A07 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2bQ56A07 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2bQ56A07 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2bQ56A07 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Scn2bQ56A07 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Scn2bQ56A07 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Scn2bQ56A07 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2bQ56A07 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2bQ56A07 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2bQ56A07 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2bQ56A07 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2bQ56A07 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.5■□□□□ 0.39
Scn2bQ56A07 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Scn2bQ56A07 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2bQ56A07 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2bQ56A07 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2bQ56A07 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2bQ56A07 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Scn2bQ56A07 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scn2bQ56A07 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.49■□□□□ 0.39
Scn2bQ56A07 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn2bQ56A07 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn2bQ56A07 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.49■□□□□ 0.39
Scn2bQ56A07 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.49■□□□□ 0.39
Scn2bQ56A07 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn2bQ56A07 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.49■□□□□ 0.39
Scn2bQ56A07 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.49■□□□□ 0.39
Scn2bQ56A07 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn2bQ56A07 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn2bQ56A07 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scn2bQ56A07 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Scn2bQ56A07 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Scn2bQ56A07 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scn2bQ56A07 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2bQ56A07 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2bQ56A07 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2bQ56A07 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2bQ56A07 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2bQ56A07 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2bQ56A07 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2bQ56A07 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Scn2bQ56A07 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2bQ56A07 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2bQ56A07 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2bQ56A07 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.48■□□□□ 0.39
Scn2bQ56A07 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2bQ56A07 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Scn2bQ56A07 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2bQ56A07 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2bQ56A07 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.48■□□□□ 0.39
Scn2bQ56A07 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.48■□□□□ 0.39
Scn2bQ56A07 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scn2bQ56A07 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms