Protein–RNA interactions for Protein: Q3V079

Bbof1, Basal body-orientation factor 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbof1Q3V079 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bbof1Q3V079 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bbof1Q3V079 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.41■□□□□ 0.7
Bbof1Q3V079 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Bbof1Q3V079 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Bbof1Q3V079 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bbof1Q3V079 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bbof1Q3V079 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.41■□□□□ 0.7
Bbof1Q3V079 Gm2559-201ENSMUST00000201323 363 ntBASIC19.41■□□□□ 0.7
Bbof1Q3V079 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.41■□□□□ 0.7
Bbof1Q3V079 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bbof1Q3V079 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bbof1Q3V079 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bbof1Q3V079 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bbof1Q3V079 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bbof1Q3V079 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bbof1Q3V079 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.41■□□□□ 0.7
Bbof1Q3V079 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC19.41■□□□□ 0.7
Bbof1Q3V079 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Bbof1Q3V079 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Bbof1Q3V079 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bbof1Q3V079 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bbof1Q3V079 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.4■□□□□ 0.7
Bbof1Q3V079 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.4■□□□□ 0.7
Bbof1Q3V079 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bbof1Q3V079 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bbof1Q3V079 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Bbof1Q3V079 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Bbof1Q3V079 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.4■□□□□ 0.7
Bbof1Q3V079 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bbof1Q3V079 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bbof1Q3V079 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bbof1Q3V079 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bbof1Q3V079 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bbof1Q3V079 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bbof1Q3V079 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Bbof1Q3V079 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bbof1Q3V079 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bbof1Q3V079 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Bbof1Q3V079 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Bbof1Q3V079 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Bbof1Q3V079 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.39■□□□□ 0.7
Bbof1Q3V079 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
Bbof1Q3V079 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Bbof1Q3V079 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Bbof1Q3V079 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Bbof1Q3V079 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Bbof1Q3V079 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Bbof1Q3V079 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Bbof1Q3V079 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Bbof1Q3V079 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Bbof1Q3V079 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.39■□□□□ 0.69
Bbof1Q3V079 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Bbof1Q3V079 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Bbof1Q3V079 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.39■□□□□ 0.69
Bbof1Q3V079 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Bbof1Q3V079 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Bbof1Q3V079 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Bbof1Q3V079 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.39■□□□□ 0.69
Bbof1Q3V079 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Bbof1Q3V079 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Bbof1Q3V079 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Bbof1Q3V079 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Bbof1Q3V079 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Bbof1Q3V079 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Bbof1Q3V079 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Bbof1Q3V079 Gm2399-201ENSMUST00000104944 225 ntBASIC19.38■□□□□ 0.69
Bbof1Q3V079 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.38■□□□□ 0.69
Bbof1Q3V079 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Bbof1Q3V079 Gm20049-201ENSMUST00000219950 730 ntBASIC19.38■□□□□ 0.69
Bbof1Q3V079 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Bbof1Q3V079 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Bbof1Q3V079 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Bbof1Q3V079 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Bbof1Q3V079 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Bbof1Q3V079 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Bbof1Q3V079 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Bbof1Q3V079 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Bbof1Q3V079 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Bbof1Q3V079 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.37■□□□□ 0.69
Bbof1Q3V079 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Bbof1Q3V079 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.37■□□□□ 0.69
Bbof1Q3V079 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Bbof1Q3V079 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Bbof1Q3V079 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Bbof1Q3V079 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Bbof1Q3V079 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Bbof1Q3V079 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Bbof1Q3V079 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Bbof1Q3V079 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Bbof1Q3V079 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Bbof1Q3V079 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Bbof1Q3V079 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.36■□□□□ 0.69
Bbof1Q3V079 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Bbof1Q3V079 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.36■□□□□ 0.69
Bbof1Q3V079 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.36■□□□□ 0.69
Bbof1Q3V079 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Bbof1Q3V079 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Bbof1Q3V079 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Bbof1Q3V079 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms